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  • qust Public

    QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis

    Python 14 2 Updated Dec 5, 2024

  • scinfer Public

    Forked from SBU-BMI/wsinfer

    🔥 🚀 Blazingly fast pipeline for patch- (and object-) based classification in whole slide images

    Python Apache License 2.0 Updated Jul 11, 2024

  • bibtexformat Public

    Perl GNU General Public License v3.0 Updated Jul 1, 2024

  • ganstr Public

    Python Updated Jan 31, 2024

  • wu_yia_hue Public

    Updated Jun 19, 2023

  • sptx2 Public

    Jupyter Notebook Updated May 3, 2023

  • FastAutoGPT Public

    Forked from Significant-Gravitas/AutoGPT

    An experimental open-source attempt to make GPT-4 fully autonomous based on FastChat

    Python MIT License Updated Apr 16, 2023

  • gpt Public

    Python Updated Apr 8, 2023

  • ST-PAIN Public

    Jupyter Notebook Updated Apr 4, 2022

  • ST-AnD Public

    ST-AnD: Single Cell Gene Expression Prediction using H&E Images based on Spatial Transcriptomics

    Jupyter Notebook Updated Mar 17, 2022

  • qupath-extension-stardist Public

    Forked from qupath/qupath-extension-stardist

    QuPath extension to run StarDist nucleus detection

    Java Apache License 2.0 Updated Mar 6, 2022

  • stand Public

    STAnD: a deep learning approach for single cell gene expression prediction using h&e images based on spatial transcriptomics

    Updated Feb 28, 2022

  • learngit Public

    Forked from michaelliao/learngit

    教程→ https://www.liaoxuefeng.com/wiki/896043488029600 推送请使用UTF-8编码

    Updated Dec 8, 2021

  • validation Public

    Jupyter Notebook Updated Nov 2, 2021

  • qupath-0.3.1-SNAPSHOT Public

    Java 1 1 GNU General Public License v3.0 Updated Nov 1, 2021

  • python-javabridge Public

    Forked from LeeKamentsky/python-javabridge

    Python wrapper for the Java Native Interface

    Python Other Updated Mar 8, 2020

  • qupath-extension-weka Public

    Java Updated Feb 21, 2020

  • qupath-weka-extension Public

    Forked from qupath/qupath-weka-extension

    Extension to enable Weka within QuPath - **QuPath v0.1.2 only**

    Java GNU General Public License v3.0 Updated Dec 12, 2019

  • vnet-tensorflow Public

    Forked from jackyko1991/vnet-tensorflow

    Implementation of vnet in tensorflow for medical image segmentation

    Python Updated Apr 8, 2019

  • qupath Public

    Forked from qupath/qupath

    QuPath - Open Source Digital Pathology

    Java 1 GNU General Public License v3.0 Updated Mar 15, 2019

  • openremoteslide Public

    Forked from openslide/openslide

    OpenRemoteSlide: An Extension of OpenSlide for Remote Access of Whole Slide Images

    C 11 1 Other Updated Mar 12, 2019

  • PyCudaSampling Public

    A Python Package for Accerelated Image Sampling using CUDA

    C++ MIT License Updated Mar 1, 2019

  • gridstack.js Public

    Forked from gridstack/gridstack.js

    Design your own drag-and-drop dashboards with ease

    JavaScript MIT License Updated Feb 11, 2019

  • libnice Public

    Forked from libnice/libnice

    An implementation of the IETF’s Interactive Connectivity Establishment (ICE) standard — this is an official read-only mirror of the upstream repository at https://gitlab.freedesktop.org/libnice/lib…

    C Other Updated Jan 24, 2019

  • xae4hne Public

    eXclusive Autoencoder (XAE) for Nucleus Detection and Classification on Hematoxylin and Eosin (H&E) Stained Histopathological Images

    Python 2 Updated Jan 2, 2019

  • HistoQC Public

    Forked from choosehappy/HistoQC

    HistoQC is an open-source quality control tool for digital pathology slides

    JavaScript Updated Nov 14, 2018

  • xae Public

    Python Updated Nov 7, 2018

  • histopath-gtm Public

    C++ Updated Oct 17, 2018

  • cudafd Public

    CUDA-based Fractal Dimension

    Cuda 1 Updated Jan 13, 2018

  • openremoteslide.old Public

    OpenRemoteSlide: Accessing Digital Pathological Whole-Slide Images from Remote

    Roff 3 Other Updated Nov 23, 2017