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1. scicast scicast Public

   Single Cell Iterative Clustering and Significance Testing

   Python 5 1

2. RNA-sequence-tools RNA-sequence-tools Public

   Tools for RNA seq and gene annotation

   Python 4 2

3. ips17-BU3-single-cell ips17-BU3-single-cell Public

   The full data and code for the paper: Prospective isolation and single cell profiling of NKX2-1+/CD47+ human lung progenitors derived from pluripotent stem cells. Hawkins et al. JCI

   R 2

4. Bioinformatics Bioinformatics Public

   Random Bioinformatics

   Python 1

5. gene_graphlasso gene_graphlasso Public

   Creates network graphs from single cell expression data.

   Python

6. sra_fetch sra_fetch Public

   GUI app for downloading whole SRA series or individual and metadata. Additional options for uploading to S3

   Python