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  • ens-zf-annotation-issue Public

    Ensembl zebrafish annotation issues

    Perl Updated Feb 4, 2025

  • AIrsenal Public

    Forked from alan-turing-institute/AIrsenal

    Machine learning Fantasy Premier League team

    Jupyter Notebook MIT License Updated Jan 31, 2025

  • sarek Public

    Forked from nf-core/sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    Nextflow MIT License Updated Jan 8, 2025

  • rnaseq2024 Public

    Course: Next steps in gene prioritisation | Introduction to RNA-seq and functional interpretation 2024

    HTML Updated Jan 1, 2025

  • rnaseq2023 Public

    Course: Next steps in gene prioritisation | Introduction to RNA-seq and functional interpretation 2023

    HTML Updated Jan 1, 2025

  • mbl2023 Public

    Course: Zebrafish Genome Literacy Workshop

    HTML Updated Jan 1, 2025

  • mbl2022 Public

    Course: Zebrafish Genome Literacy Workshop

    HTML Updated Jan 1, 2025

  • HeadloopApp Public

    Forked from richysix/HeadloopApp

    Web app for designing headloop PCR primers

    Python GNU General Public License v3.0 Updated Jan 1, 2025

  • funcgen2019 Public

    Course: Bioinformatics & Functional Genomics in Zebrafish 2019

    HTML 1 Updated Jan 1, 2025

  • funcgen2022 Public

    Course: Bioinformatics & Functional Genomics in Zebrafish 2022

    HTML Updated Jan 1, 2025

  • buschlab.org Public

    buschlab.org website

    HTML GNU Affero General Public License v3.0 Updated Jan 1, 2025

  • differentialabundance Public

    Forked from nf-core/differentialabundance

    Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

    Nextflow MIT License Updated Dec 18, 2024

  • adventofcode Public

    Advent of Code

    Python Updated Dec 12, 2024

  • Apocrita Public

    Shell 2 1 Updated Dec 2, 2024

  • zfvarcall Public

    Zebrafish variant calling pipeline

    Nextflow MIT License Updated Nov 9, 2024

  • topgo-wrapper Public

    Wrapper for topGO

    Perl 1 Other Updated Oct 18, 2024

  • dockerfiles Public

    Dockerfiles

    Dockerfile Updated Oct 14, 2024

  • bioinf-gen Public

    Forked from richysix/bioinf-gen

    Collection of miscellaneous bioinformatics scripts

    R GNU General Public License v3.0 Updated Oct 7, 2024

  • bio-misc-py Public

    Miscellaneous Python bioinformatics scripts

    Python 1 GNU General Public License v3.0 Updated Oct 2, 2024

  • misc Public

    Miscellaneous scripts

    Perl GNU General Public License v3.0 Updated Aug 5, 2024

  • python-mastery Public

    Forked from dabeaz-course/python-mastery

    Advanced Python Mastery (course by @dabeaz)

    Python Creative Commons Attribution Share Alike 4.0 International Updated Nov 8, 2023

  • practical-python Public

    Forked from dabeaz-course/practical-python

    Practical Python Programming (course by @dabeaz)

    Python Creative Commons Attribution Share Alike 4.0 International Updated Sep 11, 2023

  • bio-misc Public

    Miscellaneous bioinformatics scripts

    Perl 1 GNU General Public License v3.0 Updated Jun 30, 2023

  • git-example Public

    Python BSD 3-Clause "New" or "Revised" License Updated Jun 28, 2023

  • bsa Public

    Forked from xiekunwhy/bsa

    Bulked-Segregant Analysis using vcf file with or without parents

    Perl GNU General Public License v3.0 Updated Mar 15, 2023

  • parkrun Public

    parkrun-related code

    Perl GNU Affero General Public License v3.0 Updated Nov 17, 2022

  • RefGenEdit Public

    Reference Genome Editor

    Perl 1 Other Updated Nov 17, 2022

  • DETCT Public

    Differential Expression Transcript Counting Technique

    Perl 3 4 Other Updated Nov 17, 2022

  • beluga Public

    Beluga

    Updated Jul 13, 2022

  • deb-get Public

    Forked from wimpysworld/deb-get

    apt-get functionality for .debs published in 3rd party repositories or via direct download 📦

    Shell MIT License Updated Jun 1, 2022