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| This file documents the revision history for Perl extension solGS. | ||
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| 0.01 2012-01-31 10:55:11 | ||
| - initial revision, generated by Catalyst |
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| #!/usr/bin/env perl | ||
| # IMPORTANT: if you delete this file your app will not work as | ||
| # expected. You have been warned. | ||
| use inc::Module::Install; | ||
| use Module::Install::Catalyst; # Complain loudly if you don't have | ||
| # Catalyst::Devel installed or haven't said | ||
| # 'make dist' to create a standalone tarball. | ||
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| name 'solGS'; | ||
| all_from 'lib/solGS.pm'; | ||
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| requires 'Catalyst::Runtime' => '5.80032'; | ||
| requires 'Catalyst::Plugin::ConfigLoader'; | ||
| requires 'Catalyst::Plugin::Static::Simple'; | ||
| requires 'Catalyst::Action::RenderView'; | ||
| requires 'Moose'; | ||
| requires 'namespace::autoclean'; | ||
| requires 'Config::General'; # This should reflect the config file format you've chosen | ||
| # See Catalyst::Plugin::ConfigLoader for supported formats | ||
| test_requires 'Test::More' => '0.88'; | ||
| catalyst; | ||
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| install_script glob('script/*.pl'); | ||
| auto_install; | ||
| WriteAll; |
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| Run script/solgs_server.pl to test the application. |
Empty file.
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| static/documents/ |
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| #organism form | ||
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| action: /gs/submit/population | ||
| method: POST | ||
| ___ | ||
| elements: | ||
| - | ||
| type: Text | ||
| name: pop_name | ||
| label: Name | ||
| size: 42 | ||
| constraints: | ||
| -Required | ||
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| - | ||
| type: Textarea | ||
| name: pop_desc | ||
| label: Description | ||
| rows: 5 | ||
| cols: 44 | ||
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| - | ||
| type: Label | ||
| name: pop_is_public | ||
| label: Do you want to make the data public | ||
| value: true | ||
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| - | ||
| type: Checkbox | ||
| name: pop_is_public | ||
| label: Yes | ||
| value: true | ||
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| - | ||
| type: Checkbox | ||
| name: pop_is_public | ||
| label: No | ||
| value: false | ||
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| - | ||
| type: Hidden | ||
| name: type | ||
| value: pop_form | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
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| action: /gs/submit/phenotype | ||
| method: POST | ||
| --- | ||
| elements: | ||
| - | ||
| type: File | ||
| name: pheno_file | ||
| size: 40 | ||
| constraints: | ||
| -type: file | ||
| -required | ||
| -minimum: 1 | ||
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| - | ||
| type: Fidden | ||
| name: type | ||
| value: pheno_form | ||
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| - | ||
| type: Hidden | ||
| name: pop_id | ||
| value: | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
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| action: /gs/submit/genotype | ||
| method: POST | ||
| --- | ||
| elements: | ||
| - | ||
| type: File | ||
| name: geno_file | ||
| size: 40 | ||
| constraints: | ||
| -type: file | ||
| -required | ||
| -minimum: 1 | ||
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| - | ||
| type: Hidden | ||
| name: type | ||
| value: geno_form | ||
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| - | ||
| type: Hidden | ||
| name: pop_id | ||
| value: | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
| --- | ||
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| #organism form | ||
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| action: /gs/submit/phenotype | ||
| method: POST | ||
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| --- | ||
| elements: | ||
| - | ||
| type: file | ||
| name: pheno_file | ||
| size: 40 | ||
| - | ||
| type: hidden | ||
| name: type | ||
| value: pheno_form | ||
| - | ||
| type: hidden | ||
| name: pop_id | ||
| value: <% $pop_id %> > | ||
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| - | ||
| type: submit | ||
| value: Submit | ||
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| --- | ||
| elements: | ||
| - | ||
| type: file | ||
| name: geno_file | ||
| size: 40 | ||
| - | ||
| type: hidden | ||
| name: type | ||
| value: geno_form | ||
| - | ||
| type: hidden | ||
| name: pop_id | ||
| value: <% $pop_id %> > | ||
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| - | ||
| type: submit | ||
| value: Submit | ||
| --- | ||
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| action: /gs/submit/population | ||
| method: POST | ||
| elements: | ||
| - | ||
| type: text | ||
| name: pop_name | ||
| size: 42 | ||
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| - | ||
| type: textarea | ||
| name: pop_desc" rows = 5 cols=44></textarea></td> | ||
| </tr> | ||
| <tr> | ||
| <td><% $parent_f%><%$required %> </td> | ||
| <td><input type="text" name="pop_female_parent" size=24></td> | ||
| <td><% $parent_m %><% $required %> </td> | ||
| <td><input type="text" name="pop_male_parent" size=24></td> | ||
| </tr> | ||
| <tr> | ||
| <td>Recurrent parent</td> | ||
| <td><input type="text" name="pop_recurrent_parent" size=24></td> | ||
| <td>Donor parent</td> | ||
| <td><input type="text" name="pop_donor_parent" size=24></td> | ||
| </tr> | ||
| <tr> | ||
| <td>Do you want to make the data public?</td> | ||
| <td><input type="radio" name="pop_is_public" value="true" checked />Yes</td> | ||
| <td><input type="radio" name="pop_is_public" value="false" />No</td> | ||
| </tr> | ||
| <tr> | ||
| <td> </td><td> </td> | ||
| <td><input type="hidden" name="type" value="pop_form"></td> | ||
| <td><input type="submit" value="Submit"></td> | ||
| </tr> | ||
| </table> | ||
| </form> |
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| #organism form goes here... | ||
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| action: /gs/submit/population | ||
| method: POST | ||
| ___ | ||
| elements: | ||
| - | ||
| type: Text | ||
| name: pop_name | ||
| label: Name | ||
| size: 42 | ||
| constraints: | ||
| -Required | ||
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| - | ||
| type: Textarea | ||
| name: pop_desc | ||
| label: Description | ||
| rows: 5 | ||
| cols: 44 | ||
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| - | ||
| type: Label | ||
| name: pop_is_public | ||
| label: Do you want to make the data public | ||
| value: true | ||
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| - | ||
| type: Checkbox | ||
| name: pop_is_public | ||
| label: Yes | ||
| value: true | ||
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| - | ||
| type: Checkbox | ||
| name: pop_is_public | ||
| label: No | ||
| value: false | ||
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| - | ||
| type: Hidden | ||
| name: type | ||
| value: pop_form | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
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| action: /gs/submit/phenotype | ||
| method: POST | ||
| --- | ||
| elements: | ||
| - | ||
| type: File | ||
| name: pheno_file | ||
| size: 40 | ||
| constraints: | ||
| -type: file | ||
| -required | ||
| -minimum: 1 | ||
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| - | ||
| type: Fidden | ||
| name: type | ||
| value: pheno_form | ||
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| - | ||
| type: Hidden | ||
| name: pop_id | ||
| value: | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
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| action: /gs/submit/genotype | ||
| method: POST | ||
| --- | ||
| elements: | ||
| - | ||
| type: File | ||
| name: geno_file | ||
| size: 40 | ||
| constraints: | ||
| -type: file | ||
| -required | ||
| -minimum: 1 | ||
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| - | ||
| type: Hidden | ||
| name: type | ||
| value: geno_form | ||
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| - | ||
| type: Hidden | ||
| name: pop_id | ||
| value: | ||
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| - | ||
| type: Submit | ||
| value: Submit | ||
| --- | ||
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