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Python implementation of the Pattern Search Implicit Filtering Algorithm

Python 5 Updated Jul 23, 2018

Making Protein folding accessible to all!

Jupyter Notebook 2,066 511 Updated Jan 16, 2025

Symbolic Kinetic Models with Python

Python 30 14 Updated Sep 20, 2024

Mathematical Optimization in Julia. Local, global, gradient-based and derivative-free. Linear, Quadratic, Convex, Mixed-Integer, and Nonlinear Optimization in one simple, fast, and differentiable i…

Julia 749 85 Updated Jan 21, 2025

N-dimensional linear interpolation on a rectangular grid in C++

C++ 59 21 Updated Jan 27, 2020

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

MATLAB 255 321 Updated Jan 8, 2025

Efficient random sampling for COBRA models

MATLAB 13 1 Updated Oct 14, 2021

A Python 3 implementation of Thermodynamics-based Flux Analysis

Python 39 27 Updated Sep 27, 2024

📊 Add marginal histograms to ggplot2, and more ggplot2 enhancements

R 384 45 Updated Jun 5, 2024