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Commits on May 11, 2024

• fixed typing error of anchor_gt_residue

  

  dingquanyu

  authored and

  jnwei

  committed
  d968098

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• Update tests and comments

  

  dingquanyu

  authored and

  jnwei

  committed
  6f1329e

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• update comments;fixed typos

  

  dingquanyu

  authored and

  jnwei

  committed
  9a6eb64

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• added comments

  

  dingquanyu

  authored and

  jnwei

  committed
  bc24032

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• fixed typing errors; added more comments

  

  dingquanyu

  authored and

  jnwei

  committed
  04d6378

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• make sure no padded features are going to be selected as anchors

  

  dingquanyu

  authored and

  jnwei

  committed
  6d41838

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• added typing hints and fixed some comments

  

  dingquanyu

  authored and

  jnwei

  committed
  f7571e2

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• restore to the verison on main

  

  dingquanyu

  authored and

  jnwei

  committed
  77cb413

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• remove unnecessary lines

  

  dingquanyu

  authored and

  jnwei

  committed
  d1a32aa

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• fixed bugs in unittests for multi-chain permutation. now working on extra subtests

  

  dingquanyu

  authored and

  jnwei

  committed
  0df04f3

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• make sure padded asym_id won't affect permutation steps

  

  dingquanyu

  authored and

  jnwei

  committed
  17b8c14

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Commits on May 10, 2024

• fixed typing error of anchor_gt_residue

  dingquanyu

  committed
  15113dc

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• Update tests and comments

  dingquanyu

  committed
  5f78237

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• update comments;fixed typos

  dingquanyu

  committed
  61191bf

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Commits on Mar 21, 2024

• added comments

  dingquanyu

  committed
  2dbc8c0

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• fixed typing errors; added more comments

  dingquanyu

  committed
  8dfe77e

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Commits on Feb 20, 2024

• make sure no padded features are going to be selected as anchors

  dingquanyu

  committed
  170d9c5

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Commits on Feb 16, 2024

• added typing hints and fixed some comments

  dingquanyu

  committed
  7df201e

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Commits on Feb 15, 2024

• restore to the verison on main

  dingquanyu

  committed
  2c56566

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• remove unnecessary lines

  dingquanyu

  committed
  aa18a56

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• fixed bugs in unittests for multi-chain permutation. now working on extra subtests

  dingquanyu

  committed
  d74b09c

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• make sure padded asym_id won't affect permutation steps

  dingquanyu

  committed
  df96b58

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Commits on Dec 15, 2023

• Update data_pipeline.py

  dingquanyu

  authored
  989f2d9

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Commits on Dec 6, 2023

• Merge branch 'multimer' into speedup-dataloader

  dingquanyu

  authored
  6f26b0a

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Commits on Oct 12, 2023

• move the kabsch rotation step to gpu

  dingquanyu

  committed
  cdfb0c7

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Commits on Oct 3, 2023

• fixed alignments when permutation is turned off

  dingquanyu

  committed
  058fc74

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Commits on Sep 28, 2023

• remove debug statements

  dingquanyu

  committed
  a9d6503

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• move ground truth preparation out of process_tensors_from_config

  dingquanyu

  committed
  61c7640

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• update feature_pipeline accordingly

  dingquanyu

  committed
  a9cf892

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• update the returned features when it's not training mode in multimer input pipeline

  dingquanyu

  committed
  9aebc20

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• update permutation logic so that it check all valid anchor pairs

  dingquanyu

  committed
  6838935

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• fixed the return issue in np_example_to_features when training monomer

  dingquanyu

  committed
  2da285a

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• anchor selection funciton now returns a list of possible pred anchors

  dingquanyu

  committed
  cb43a5b

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Commits on Sep 26, 2023

• added logging infor about filtering results;revert filtering criteria back to default

  dingquanyu

  committed
  f6cc4a1

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• update anchor selection function logic

  dingquanyu

  committed
  51f3325

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