fix(web): fix path to json

scripts/convert_to_web_app_json.py

@@ -7,6 +7,7 @@
 
 import json
 import os
+from shutil import copyfile
 
 import numpy as np
 import pandas as pd
@@ -141,7 +142,7 @@ def update_per_cluster_distribution(cluster_data, country, distribution):
 
         frequency = 0
         if total_sequences != 0:
-          frequency = cluster_sequences / total_sequences
+            frequency = cluster_sequences / total_sequences
 
         if len(distribution) == 0:
             distribution.append({'week': week, 'frequencies': {country: frequency}, 'interp': {country: interp},
@@ -243,3 +244,6 @@ def add_cluster_properties(cluster):
 
     with open(os.path.join(output_path, "countryStyles.json"), "w") as fh:
         json.dump(country_styles, fh, indent=2, sort_keys=True)
+
+    copyfile(os.path.join(cluster_tables_path, 'perVariant_countries_toPlot.json'),
+             os.path.join(output_path, "countriesToPlot.json"))

web/data/countriesToPlot.json

@@ -0,0 +1 @@
+{"Spain": "True", "Netherlands": "True", "United Kingdom": "True", "Belgium": "True", "Switzerland": "True", "Ireland": "True", "Norway": "True", "France": "True", "Denmark": "True", "Germany": "True", "Italy": "True", "Sweden": "True", "Australia": "True", "Latvia": "False", "Lithuania": "False", "Luxembourg": "True", "New Zealand": "False", "Portugal": "True", "Finland": "False", "Hungary": "True", "USA": "True", "South Africa": "True", "Israel": "False", "Turkey": "False", "Czech Republic": "True", "Brazil": "True"}

web/src/io/getCountryColor.ts

@@ -1,9 +1,8 @@
 import { get } from 'lodash'
 
+import countriesToPlot from 'src/../data/countriesToPlot.json'
 import countryStyles from 'src/../data/countryStyles.json'
 
-import countriesToPlot from '../../../cluster_tables/perVariant_countries_toPlot.json'
-
 export function getCountryStyle(country: string) {
   return get<Record<string, { c: string; ls: string }>, string>(countryStyles, country) ?? { c: '#555555', ls: '-' }
 }