jameshadfield
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedAug 30, 2024 -
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ebola-nord-kivu Public
Forked from inrb-drc/ebola-nord-kivumostly unpublished data relating to the 2018-20 Nord Kivu DRC ebola outbreak
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phandango Public
an interactive viewer for populations of bacterial genomes linked by a phylogeny
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covariants Public
Forked from hodcroftlab/covariantsReal-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Python GNU Affero General Public License v3.0 UpdatedJan 19, 2021 -
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HCoV-19-Genomics-Nextstrain Public
Forked from andersen-lab/HCoV-19-Genomics-NextstrainRepo for local NextStrain build
UpdatedJun 16, 2020 -
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phandangoExampleData Public
The data underlying the examples on phandango.net
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rampart Public
Forked from artic-network/rampartRead Assignment, Mapping, and Phylogenetic Analysis in Real Time
JavaScript GNU General Public License v3.0 UpdatedMar 21, 2018 -
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript BSD 3-Clause "New" or "Revised" License UpdatedMar 5, 2018 -
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pan-genome-t-SNE Public
t-SNE dimension reduction of bacterial pan genome data
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phylocanvas Public
Forked from SanchitAggarwal/PhyloCanvasPhylogenetic tree visualisation for the web.
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minorVariants Public
analysis of minor allele resistance (variants) using pileups across known positions
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understandingGubbins Public
Helper scripts to parse gubbins and BratNextGen output in conjunction with iCANDY