use updated roxygen2 vers 4.1.0

jamieo-ms · Jan 27, 2015 · 1df814d · 1df814d
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diff --git a/NAMESPACE b/NAMESPACE
@@ -1,4 +1,4 @@
-# Generated by roxygen2 (4.0.2): do not edit by hand
+# Generated by roxygen2 (4.1.0): do not edit by hand
 
 S3method(plot,pkgDepGraph)
 S3method(print,pkgDep)

diff --git a/man/addOldPackage.Rd b/man/addOldPackage.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/addPackages.R
 \name{addOldPackage}
 \alias{addOldPackage}
 \title{Add old package versions to a miniCRAN repository.}

diff --git a/man/addPackage.Rd b/man/addPackage.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/addPackages.R
 \name{addPackage}
 \alias{addPackage}
 \title{Add packages to a miniCRAN repository.}
@@ -25,7 +26,7 @@ addPackage(pkgs = NULL, path = NULL, repos = getOption("repos"),
 \item{quiet}{If TRUE, suppress status messages (if any), and the progress bar during download.}
 }
 \value{
-Installs the packages, rebuilds the package index invisibly returns the number of packages writen to the index files.
+Installs the packages, rebuilds the package index, and returns the number of packages writen to the index files.
 }
 \description{
 Add packages to a miniCRAN repository.

diff --git a/man/addPackageListingGithub.Rd b/man/addPackageListingGithub.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/github-functions.R
 \name{addPackageListingGithub}
 \alias{addPackageListingGithub}
 \title{Add DESCRIPTION information from package on github.}

diff --git a/man/basePkgs.Rd b/man/basePkgs.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/pkgDep.R
 \name{basePkgs}
 \alias{basePkgs}
 \title{Returns names of base packages.}

diff --git a/man/checkVersions.Rd b/man/checkVersions.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/addPackages.R
 \name{checkVersions}
 \alias{checkVersions}
 \title{Check for previous versions of packages in a miniCRAN repository.}

diff --git a/man/cranJuly2014.Rd b/man/cranJuly2014.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/minicran-package.R
 \docType{data}
 \name{cranJuly2014}
 \alias{cranJuly2014}

diff --git a/man/getCranDescription.Rd b/man/getCranDescription.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/getCranDescription.R
 \name{getCranDescription}
 \alias{getCranDescription}
 \title{Scrape DESCRIPTION from CRAN for each pkg.}

diff --git a/man/makeDepGraph.Rd b/man/makeDepGraph.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/makeDepGraph.R
 \name{makeDepGraph}
 \alias{makeDepGraph}
 \title{Create dependency graph from available packages.}

diff --git a/man/makeLibrary.Rd b/man/makeLibrary.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/makeRepo.R
 \name{makeLibrary}
 \alias{makeLibrary}
 \title{Deprecated function to download packages to local folder.}

diff --git a/man/makeRepo.Rd b/man/makeRepo.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/makeRepo.R
 \name{makeRepo}
 \alias{makeRepo}
 \alias{updateRepoIndex}
@@ -8,7 +9,7 @@ makeRepo(pkgs, path, repos = getOption("repos"), type = "source",
   Rversion = R.version, download = TRUE, writePACKAGES = TRUE,
   quiet = FALSE)
 
-updateRepoIndex(path, type, Rversion)
+updateRepoIndex(path, type = "source", Rversion = R.version)
 }
 \arguments{
 \item{pkgs}{Character vector of packages to download}

diff --git a/man/miniCRAN-package.Rd b/man/miniCRAN-package.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/minicran-package.R
 \docType{package}
 \name{miniCRAN-package}
 \alias{miniCRAN}

diff --git a/man/pkgAvail.Rd b/man/pkgAvail.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/pkgDep.R
 \name{pkgAvail}
 \alias{pkgAvail}
 \title{Reads available packages from CRAN repository.}

diff --git a/man/pkgDep.Rd b/man/pkgDep.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/pkgDep.R
 \name{pkgDep}
 \alias{pkgDep}
 \title{Retrieves package dependencies.}

diff --git a/man/pkgDepTools.Rd b/man/pkgDepTools.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/pkgDepTools.R
 \name{split_op_version}
 \alias{cleanPkgField}
 \alias{split_dependencies}

diff --git a/man/plot.pkgDepGraph.Rd b/man/plot.pkgDepGraph.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/plot.pkgDepGraph.R
 \name{plot.pkgDepGraph}
 \alias{plot.pkgDepGraph}
 \title{Plots a package dependency graph.}

diff --git a/man/repoBinPath.Rd b/man/repoBinPath.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/helpers.R
 \name{repoBinPath}
 \alias{repoBinPath}
 \title{Construct path to full binary location}

diff --git a/man/repoPrefix.Rd b/man/repoPrefix.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/helpers.R
 \name{repoPrefix}
 \alias{repoPrefix}
 \title{Get the path to the repo directory containing the package files.}

diff --git a/man/twodigitRversion.Rd b/man/twodigitRversion.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/helpers.R
 \name{twodigitRversion}
 \alias{twodigitRversion}
 \title{Get a two-digit version of the R version}

diff --git a/man/updatePackages.Rd b/man/updatePackages.Rd
@@ -1,4 +1,5 @@
-% Generated by roxygen2 (4.0.2): do not edit by hand
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/updatePackages.R
 \name{updatePackages}
 \alias{oldPackages}
 \alias{updatePackages}