biotools

A collection of tools and scripts related to bioinformatics/genome science.

Contents

• bedAnnotator: Standalone R-Script for annotation of bed files with gff, gtf or other bed files.
• bedIntersector: A basic shell script to intersect and merge multiple bed files using bedTools.
• build_annotation_table.py: A python script to parse blast output (tabular, xml and textual) and annotate sequences in a fasta file.

Contribution

• Jens Preußner