BEELINE: evaluation of algorithms for gene regulatory network inference

A simulator for single-cell expression data guided by gene regulatory networks

Codebase for INVASE: Instance-wise Variable Selection - 2019 ICLR

Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"

Build your neural network easy and fast, 莫烦Python中文教学

PyTorch Tutorial for Deep Learning Researchers

Repo for counting stars and contributing. Press F to pay respect to glorious developers.

Python Implementation of SIMLR for single-cell visualization and analysis

An efficient way to convert gff3 annotation files into EMBL format ready to submit.

A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

tools for working with genome variation graphs

⚡ ♒ Rapid prokaryotic genome annotation

Analysis of single cell RNA-seq data course

Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave

Intro materials for mphil students to get started on damtp machines.

Jupyter metapackage for installation, docs and chat