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Python package to extend Airflow functionality with CWL1.1 support

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DOI Python 3.7 Apache 2.0 Build Status Coverage Status Downloads

CWL-Airflow

Python package to extend Apache-Airflow 2.1.4 functionality with CWL v1.1 support

Cite as

Michael Kotliar, Andrey V Kartashov, Artem Barski, CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language, GigaScience, Volume 8, Issue 7, July 2019, giz084, https://doi.org/10.1093/gigascience/giz084

Get the latest version

export PYTHON_VERSION=`python3 --version | cut -d " " -f 2 | cut -d "." -f 1,2`
pip3 install cwl-airflow --constraint https://raw.githubusercontent.com/Barski-lab/cwl-airflow/master/packaging/constraints/constraints-${PYTHON_VERSION}.txt

Latest version documentation

Get published version

pip install cwl-airflow==1.0.18

Published version documentation

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  • Python 79.7%
  • Common Workflow Language 14.5%
  • Shell 4.8%
  • Dockerfile 1.0%