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Showing results

poems about business

6 Updated Dec 10, 2024

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 941 713 Updated Dec 21, 2024

Python package with helper tools for the nf-core community.

Python 245 192 Updated Dec 20, 2024

DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)

Python 48 33 Updated Oct 16, 2022

Detect viral infection and integration sites on NGS input. Manuscript is in preparation.

Python 10 2 Updated Sep 17, 2024

An R interface to enrichR

R 77 19 Updated Dec 1, 2024

Create a clustergram visualization from a user defined network in tsv format.

JavaScript 12 9 Updated May 1, 2023

Snakemake pipeline for running MAJIQ

R 1 Updated Dec 20, 2023

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

Perl 1 Updated Apr 8, 2024
C++ 1 Updated Jun 6, 2024

RNA-seq aligner

C 1 Updated Jun 28, 2024