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RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Python package with helper tools for the nf-core community.
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
Detect viral infection and integration sites on NGS input. Manuscript is in preparation.
Create a clustergram visualization from a user defined network in tsv format.