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Commits on Oct 11, 2024

• Add separate environment (untested) for Linux Aarch64. (#95)

  kevinrue

  authored
  2423df6

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Commits on Sep 26, 2024

• Update Linux environment to avoid anaconda (#91)

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  kevinrue

  authored
  1dfa82b

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Commits on Sep 13, 2024

• re-enable plotVelocityStream() with a warning; only test on non-macOS (#89)

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  kevinrue

  authored
  4ec5297

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Commits on Sep 11, 2024

• Disable plotVelocityStream() (#88)

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  kevinrue

  authored
  14de4ca

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Commits on Jun 18, 2024

• Restore previous scvelo environment for Linux (#74)

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  kevinrue

  authored
  1aa2e91

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Commits on May 30, 2024

• Update scvelo to 0.3.2 (#71)

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  kevinrue

  and

  jwokaty

  authored
  e6f8eb9

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Commits on Feb 10, 2023

• Bugfix + updated GHA (#64)

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  csoneson

  and

  kevinrue

  authored
  aee7bd5

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Commits on Dec 14, 2021

• add example for scvelo.params argument (#57)

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  kevinrue

  and

  ATpoint

  authored
  2a59b9c

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Commits on Oct 25, 2021

• Add typing extensions (#54)

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  csoneson

  authored
  635dbaf

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Commits on Feb 22, 2021

• Update scvelo.R (#33)

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  federicomarini

  and

  kevinrue

  authored
  6509bc0

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Commits on Feb 21, 2021

• Add plotting functions to visualize RNA velocities (#30)

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  mbstadler

  and

  kevinrue

  authored
  229fea0

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Commits on Oct 11, 2020

• Convert functions to S4 methods for SCE dispatch, closes #23.

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  LTLA

  committed
  49fbf28

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Commits on Sep 13, 2020

• Add hexsticker (#20)

  kevinrue

  authored
  a624b64

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Commits on Sep 10, 2020

• Fix BiocCheck and downsample dataset in vignette (#16)

  kevinrue

  authored
  6d3ffb1

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Commits on Jul 29, 2020

• Add some explanations and reference to data to the vignette (#10)

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  csoneson

  and

  kevinrue

  authored
  226457f

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Commits on Jun 26, 2020

• Reoxygenated.

  LTLA

  committed
  bb34624

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• Added a utility to compact velocity vectors into a grid.

  LTLA

  committed
  4c5922c

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• Added the embedVelocity wrapper, which does what it says.

  LTLA

  committed
  0d6ab0d

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Commits on Jun 25, 2020

• Switch to using zellkonverter for AnnData conversion.

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  LTLA

  committed
  5f3e920

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Commits on Jun 16, 2020

• Slight rewording on ambiguous reads. (#6)

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  csoneson

  and

  LTLA

  authored
  a4352cd

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• Reoxygenated, added Charlotte to authors.

  LTLA

  committed
  7fdfe2e

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Commits on Jun 15, 2020

• Add x matrix to use for dimension reduction

  

  csoneson

  authored and

  LTLA

  committed
  fdaee79

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• docfixes, remove neighbor calculations

  

  csoneson

  authored and

  LTLA

  committed
  6737175

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• Initial support for nearest neighbors via BiocNeighbors

  

  csoneson

  authored and

  LTLA

  committed
  1aa0b7d

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• Allow scVelo function arguments to be provided

  

  csoneson

  authored and

  LTLA

  committed
  09792a6

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• scVelo does not log-transform normalized counts

  

  csoneson

  authored and

  LTLA

  committed
  6f20458

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Commits on Jun 7, 2020

• Add github action (#2)

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  kevinrue

  authored
  ac08cfd

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Commits on Jun 5, 2020

• Reoxygenated.

  LTLA

  committed
  fb1c77a

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• Added various other imports, reoxygenated.

  LTLA

  committed
  3ad0dcf

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Commits on Jun 4, 2020

• add package doc (autogenerated from DESCRIPTION)

  kevinrue

  committed
  1882788

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