This branch is 7 commits ahead of, 166 commits behind pcingola/SnpEff:master.

Name	Name	Last commit message	Last commit date
Latest commit pcingola Project updated Aug 29, 2022 0d1ee5d · Aug 29, 2022 History 2,556 Commits
.github/ISSUE_TEMPLATE	.github/ISSUE_TEMPLATE	Project updated	Dec 20, 2021
.idea	.idea	Added StringDiff and test cases	Aug 3, 2022
.settings	.settings	Project updated	Apr 2, 2021
config	config	Project updated	Aug 8, 2022
cytobands/hg19	cytobands/hg19	Added cytobands information	Sep 25, 2016
docs	docs	Project updated	Jul 13, 2022
ensembl2refSeq	ensembl2refSeq	Move ensembl to refSeq file	Oct 24, 2016
examples	examples	Project updated	Apr 10, 2015
exec	exec	Added 'exec' dir only having executable script links, this should mak…	Jan 16, 2021
galaxy	galaxy	Project updated	Apr 19, 2022
git	git	Project updated	Jan 21, 2022
lib	lib	Added required libraries	Apr 15, 2016
motif	motif	Project updated	Jan 31, 2014
papers	papers	Project updated	Jan 31, 2014
pdb	pdb	Refactoring of PDB parsing and database build seems to work	Aug 4, 2022
scripts	scripts	Project updated	Aug 29, 2022
scripts_build	scripts_build	Improving PDB parser for AlphaFold files	Aug 2, 2022
spliceSites	spliceSites	Project updated	Aug 26, 2015
src	src	Project updated	Aug 29, 2022
tests	tests	Project updated	Aug 8, 2022
.classpath	.classpath	Project updated	Apr 2, 2021
.gitignore	.gitignore	Project updated	Oct 27, 2020
.project	.project	Project updated	Jan 31, 2014
LICENSE.md	LICENSE.md	Project updated	Mar 8, 2021
README.md	README.md	Project updated	Sep 20, 2020
README_release.md	README_release.md	Project updated	Jan 21, 2022
SnpEff - Featured by SourceForge.pdf	SnpEff - Featured by SourceForge.pdf	Project updated	Apr 23, 2019
SnpEff.iml	SnpEff.iml	Project updated	Jan 10, 2022
parallel.md	parallel.md	Project updated	Mar 9, 2021
pcingola_cleanup.xml	pcingola_cleanup.xml	Project updated	Jan 31, 2014
pcingola_formatter.xml	pcingola_formatter.xml	Project updated	Jan 31, 2014
pom.xml	pom.xml	Project updated	Jan 10, 2022
requirements.txt	requirements.txt	Documentation updated	Jan 28, 2021
snpEff.config	snpEff.config	Added support for Azure key	Jan 14, 2021
test_04_TestCasesEff.csv	test_04_TestCasesEff.csv	Project updated	Apr 19, 2022
test_04_TestCasesEff.genes.txt	test_04_TestCasesEff.genes.txt	Project updated	Dec 23, 2021
v6.md	v6.md	Project updated	Aug 15, 2022

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SnpEff

Documentation: https://pcingola.github.io/SnpEff/

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Pablo Cingolani

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