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Commits on May 19, 2022

• Refactor: separate catGT call for LFP now in main script

  emilyasterjones

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  b567992

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• correcting error in new post-KS filters

  emilyasterjones

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Commits on May 17, 2022

• separating AP/NI (first run) & LFP (no gblcar) scripts

  emilyasterjones

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• Adding QC steps to label MUA & noise

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  emilyasterjones

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Commits on May 14, 2022

• update scripts so TPrime works

  emilyasterjones

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Commits on May 13, 2022

• update scripts so kilosort helper works

  emilyasterjones

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• update multi_run script so catGT works

  emilyasterjones

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• update pipfile.lock from successful pipenv install

  emilyasterjones

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• Merging with JC repo updates since Jan 8th

  emilyasterjones

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Commits on May 12, 2022

• Turning on ks_copy_fproc

  emilyasterjones

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Commits on May 11, 2022

• Matching JSON and run scripts to rig43 branch

  emilyasterjones

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Commits on Jan 16, 2022

• include 'gate_list_string' as param, use it to rename catgt output dir

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  emilyasterjones

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• change cluster labels for 'noise' only, retain 'good' and 'mua'

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  emilyasterjones

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Commits on Jan 14, 2022

• fixed python mean_waveforms calc

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  emilyasterjones

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• Implementing Alex A's changes (except scripts)

  emilyasterjones

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Commits on Jan 9, 2022

• removing psutil

  jenniferColonell

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Commits on Jan 5, 2022

• add psutil to setup.py

  jenniferColonell

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• add psutil to pipfile

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  jenniferColonell

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Commits on Nov 19, 2021

• correct skip pc metrics

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  jenniferColonell

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Commits on Oct 26, 2021

• removing row label column from csv files

  jenniferColonell

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• remove column of row labels from waveform_metrics.csv and metrics.csv

  jenniferColonell

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Commits on Oct 1, 2021

• Turning off average waveform alignment for now -- can cause issues with phy.

  jenniferColonell

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Commits on Sep 24, 2021

• removing old script files

  jenniferColonell

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• added contam_pct to metrics calculations; updated readmes;

  jenniferColonell

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Commits on Sep 20, 2021

• improved memory handling in pc quality metrics drift estimattion

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  jenniferColonell

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Commits on Jul 14, 2021

• update readme and cartoon

  jenniferColonell

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• Updated readme to include info about running metrics on manually

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  jenniferColonell

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• Now renames output files {clus_Table.npy,mean_waveforms.npy,

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  jenniferColonell

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Commits on Jul 11, 2021

• adapt mean_waveforms and metrics modules to work with phy output that

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  jenniferColonell

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Commits on Apr 26, 2021

• fix to run_one_probe to handle case where the subprocess can call

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  jenniferColonell

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Commits on Apr 14, 2021

• fixes to reading uV/bit for SpikeGLX release 30

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  jenniferColonell

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Commits on Apr 8, 2021

• fix to metrics module to skip clusters that make zero length arrays

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  jenniferColonell

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Commits on Mar 26, 2021

• removed unused parameters for catGT_helper from create_input_json --

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  jenniferColonell

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Commits on Mar 9, 2021

• corrected parsing of extraction strings to correctly handle spaces

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  jenniferColonell

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Commits on Mar 3, 2021

• changed order of imports in kilosort helper, putting matlab.engine first.

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  jenniferColonell

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