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Commits on Oct 26, 2021

• remove column of row labels from waveform_metrics.csv and metrics.csv

  jenniferColonell

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Commits on Oct 1, 2021

• Turning off average waveform alignment for now -- can cause issues with phy.

  jenniferColonell

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Commits on Sep 24, 2021

• removing old script files

  jenniferColonell

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• added contam_pct to metrics calculations; updated readmes;

  jenniferColonell

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Commits on Sep 20, 2021

• improved memory handling in pc quality metrics drift estimattion

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Commits on Jul 14, 2021

• update readme and cartoon

  jenniferColonell

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• Updated readme to include info about running metrics on manually

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• Now renames output files {clus_Table.npy,mean_waveforms.npy,

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Commits on Jul 11, 2021

• adapt mean_waveforms and metrics modules to work with phy output that

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Commits on Apr 26, 2021

• fix to run_one_probe to handle case where the subprocess can call

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  jenniferColonell

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Commits on Apr 14, 2021

• fixes to reading uV/bit for SpikeGLX release 30

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  jenniferColonell

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Commits on Apr 8, 2021

• fix to metrics module to skip clusters that make zero length arrays

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  jenniferColonell

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Commits on Mar 26, 2021

• removed unused parameters for catGT_helper from create_input_json --

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  jenniferColonell

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Commits on Mar 9, 2021

• corrected parsing of extraction strings to correctly handle spaces

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Commits on Mar 3, 2021

• changed order of imports in kilosort helper, putting matlab.engine first.

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Commits on Mar 2, 2021

• fix to linux selection in mean_waveforms

  jenniferColonell

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Commits on Feb 19, 2021

• fixed list definitions in pipeline scripts

  jenniferColonell

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Commits on Feb 17, 2021

• corrected directory in filelist script

  jenniferColonell

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• giving the KS main file a more rational name

  jenniferColonell

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• adapted for KS3, including allowing omission of any dependence on

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Commits on Feb 8, 2021

• added check for windows/linux when calling bill tools

  jenniferColonell

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Commits on Jan 31, 2021

• merging master from remote to remove outdated scriptsr' of https://github.com/jenniferColonell/ecephys_spike_sorting

  jenniferColonell

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• updating readmes, removed outdated scripts

  jenniferColonell

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• Delete test_masterpath.py

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• Delete spikeGLX_pipeline.py

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• Delete spikeGLX_noCatGT_pipeline.py

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• Delete simple_test_pipeline.py

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• Delete sglx_parallel_pipeline.py

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• Delete noCatGT_pathList_pipeline.py

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• Delete noCatGT_pathList_iseed_pipeline.py

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• Delete main_KS2_datashift.m

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• Delete ipython.html

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• Delete batch_processing_serial.py

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• Delete batch_processing_parallel_extract_from_network.py

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• Delete batch_processing_parallel.py

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