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## Material

### Mass spectrometry and proteomics using R/Bioconductor
- Description: In this course, we will use R/Bioconductor packages to
explore, process, visualise and understand mass spectrometry-based
proteomics data, starting with raw data, and proceeding with
identification and quantitation data, discussing some of their
peculiarities compared to sequencing data along the way. The
workflow is aimed at a beginner to intermediate level, such as, for
example, seasoned R users who want to get started with mass
spectrometry and proteomics, or proteomics practitioners who want to
familiarise themselves with R and Bioconductor infrastructure.
- Direct link: http://bit.ly/bioc-ms-prot
- Author: [Laurent Gatto](https://github.com/lgatto)
- Original repository: [https://github.com/lgatto/bioc-ms-prot](https://github.com/lgatto/bioc-ms-prot)
- More details: [README](https://github.com/lgatto/bioc-ms-prot/blob/master/README.md)

### Visualising biomolecular data

- Description: This Visualisation of biomolecular data course is aimed
at people who are already familiar with the R language and syntax,
and who would like to get a hands-on introduction to visualisation,
with a focus on biomolecular data in general, and proteomics in
particular. This course is meant to be mostly hands-on, with an
intuitive understanding of the underlying techniques.
- Direct link: http://bit.ly/biomolvis
- Author: [Laurent Gatto](https://github.com/lgatto)
- Original repository:
[https://github.com/lgatto/VisualisingBiomolecularData](https://github.com/lgatto/VisualisingBiomolecularData)

### A gentle introduction to git and Github
- Learning GitHub and a bit about git using a pancake recipe as an example.
- Blog post: https://lgatto.github.io/github-intro/
- Author: [Laurent Gatto](https://github.com/lgatto)

### Introduction to bioinformatics and data science
- Description: The WSBIM1207 course is an introduction to
bioinformatics (and data science) for biology and biomedical
students. It introduces bioinformatics methodology and technologies
without relying on any prerequisites. The aim of this course is for
students to be in a position to understand important notions of
bioinformatics and tackle simple bioinformatics-related problems in
R, in particular to develope simple R analysis scripts and
reproducible analysis reports to interogate, visualise and
understand data in a tidy tabular format.
- Direct link: http://bit.ly/WSBIM1207
- Author: [Laurent Gatto](https://github.com/lgatto)
- Original repository:
[https://github.com/uclouvain-cbio/wsbim1207](https://github.com/uclouvain-cbio/wsbim1207)

### Advanced R programming

- Description: A two-day course taught on the 3-4 April 2017, teaching
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- Original repository: [https://github.com/raphg/Biostat-578](https://github.com/raphg/Biostat-578)
- More details: [README](https://github.com/raphg/Biostat-578/blob/master/README.md)

### bioc-ms-prot
- Mass spectrometry and proteomics using R/Bioconductor
- Direct link: http://bit.ly/bioc-ms-prot
- Author: [Laurent Gatto](https://github.com/lgatto)
- Original repository: [https://github.com/lgatto/bioc-ms-prot](https://github.com/lgatto/bioc-ms-prot)
- More details: [README](https://github.com/lgatto/bioc-ms-prot/blob/master/README.md)

### VisualisingBiomolecularData
- Visualising biomolecular data
- Direct link: http://bit.ly/biomolvis
- Author: [Laurent Gatto](https://github.com/lgatto)
- Original repository: [https://github.com/lgatto/VisualisingBiomolecularData](https://github.com/lgatto/VisualisingBiomolecularData)

### github-intro
- Description: A gentle introduction to git and Github
- Blog post: https://lgatto.github.io/github-intro/
- Author: [Laurent Gatto](https://github.com/lgatto)

### github_tutorial
- Description: `git`/`github` guide
- Original repository: [https://github.com/kbroman/github_tutorial](https://github.com/kbroman/github_tutorial)
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