ropebwt2 working

lh3 · Jan 26, 2016 · efd598b · efd598b
1 parent 74c0e74
commit efd598b
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Showing 5 changed files with 8 additions and 469 deletions.
diff --git a/Makefile b/Makefile
@@ -5,7 +5,7 @@ WRAP_MALLOC=-DUSE_MALLOC_WRAPPERS
 AR=			ar
 DFLAGS=		-DHAVE_PTHREAD $(WRAP_MALLOC)
 LOBJS=		utils.o kthread.o kstring.o ksw.o bwt.o bntseq.o bwa.o bwamem.o bwamem_pair.o bwamem_extra.o malloc_wrap.o
-AOBJS=		QSufSort.o rope.o rle.o bwashm.o bwase.o bwaseqio.o bwtgap.o bwtaln.o bamlite.o \
+AOBJS=		rope.o rle.o bwashm.o bwase.o bwaseqio.o bwtgap.o bwtaln.o bamlite.o \
 			is.o bwtindex.o bwape.o kopen.o pemerge.o maxk.o \
 			bwtsw2_core.o bwtsw2_main.o bwtsw2_aux.o bwt_lite.o \
 			bwtsw2_chain.o fastmap.o bwtsw2_pair.o