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This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

237 59 Updated Nov 28, 2022

Custom scripts for the assessment of the novel polyRAD v1.2 variant calling pipeline study

R 1 Updated Oct 30, 2020

A DSL for data-driven computational pipelines

Groovy 2,831 651 Updated Jan 18, 2025
SCSS 548 227 Updated Mar 23, 2021

Modified version of Tassel4 (v.4.3.7) for running the Tassel-GBS pipeline modified for polyploid species with high read depths

Java 6 2 Updated Dec 12, 2018

Latex (and bibtex) stylings that have been useful to me

TeX 3 Updated Aug 25, 2016

adegenet: a R package for the multivariate analysis of genetic markers

R 175 64 Updated Sep 22, 2024