These scripts are for processing RNAseq data
remove the old repo & clone the new one with:
WORKING_DIR=$(pwd); cd /srv/gsfs0/projects/snyder/chappell/scripts; rm -rf RNAseq-Analysis; git clone https://github.com/jchap14/RNAseq-Analysis; chmod 777 ./RNAseq-Analysis/*; cd "$WORKING_DIR"