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  1. Shitty_Contigs Shitty_Contigs Public

    Find contigs/scaffolds that may be contaminants in genomic assemblies.

    Shell 2 2

  2. FapR FapR Public

    Frequency-based amplicon phasing in R

    R 1

  3. CNV_optimization CNV_optimization Public

    Optimization of estCNV by the selection of amplicons for fold change calculation using a Genetic Algorithm

    R

  4. ML_disease_prediction_microbiome ML_disease_prediction_microbiome Public

    Disease Prediction Using Machine Learning on Microbiome Data

    Jupyter Notebook 2

  5. ML_Allergen_Classifier ML_Allergen_Classifier Public

    A machine learning model to identify protein allergens from amino acid sequences

    Jupyter Notebook 1

  6. RNA_Virus_Discovery_Pipeline RNA_Virus_Discovery_Pipeline Public

    RNA virus genome mining pipeline using both similarity and deep learning techniques

    Shell 1