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  • GFF_parser Public

    Working in some analysis for gene structure found in the need of parsing a GFF

    Java Updated Jul 7, 2021

  • TF_binding_maize_leaf Public

    Repository to generate draft figures for the paper "Reconstructing the maize leaf regulatory network using ChIP-seq data of 104 transcription factors" The R_notebook folder includes text in line wi…

    HTML 2 1 MIT License Updated Jun 29, 2021

  • genomic_regulatory_kmers Public

    Reproducible training of machine learning models for functional genomics data.

    Python MIT License Updated Jun 23, 2021

  • dockerR_template Public template

    Jupyter Notebook 1 MIT License Updated Apr 4, 2020

  • docker_conda_notebooks_template Public

    MIT License Updated Mar 16, 2020

  • maria_jose_R Public

    Es un grupo de R notebooks con introducciones a R y paquetes varios en R. El nombre maria_jose_R hace referencia a que es tipo "Nacho Lee", pero "Maria Jose R" :)

    Updated Aug 12, 2018

  • semantic_biovectors Public

    Deriving embeddings from biological sequences

    Jupyter Notebook 1 1 MIT License Updated Jan 28, 2018

  • ZmTSSs_CAGE Public

    Several scripts required to analyze Maize CAGE data

    Python MIT License Updated Jan 3, 2018

  • maria_jose_python Public

    introducing-to-python introducing-to-jupyter
    Jupyter Notebook Updated Feb 26, 2017

  • scikit-learn Public

    Forked from scikit-learn/scikit-learn

    scikit-learn: machine learning in Python

    Python Other Updated Oct 31, 2016

  • scipy-2016-sklearn Public

    Forked from amueller/scipy-2016-sklearn

    Scikit-learn tutorial at SciPy2016

    Jupyter Notebook Creative Commons Zero v1.0 Universal Updated Jul 20, 2016

  • fathmm-MKL Public

    Forked from HAShihab/fathmm-MKL

    Predict the functional consequences of both coding and non-coding single nucleotide variants (SNVs)

    C Updated Oct 7, 2015