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Commits on Nov 25, 2022

• Add missing cigar case (hard clip) and remove a debugging warning

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  b044ef8

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Commits on Sep 8, 2022

• Prevent segfault when no indels encountered; Add to 86330ed, end on time when correcting haplotypes

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  committed
  bc3a521

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Commits on Sep 7, 2022

• Fix a bug in recognizing the need to end the error correction

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  committed
  86330ed

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Commits on Sep 6, 2022

• Remove unused cns_seq_t.pos array. Fix two index errors

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  committed
  f3b9ae6

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Commits on Sep 5, 2022

• Remove debugging asserts (using a temporary debug printout instead) and check return values when there are no indels types (-1 is returned)

  pd3

  committed
  2985837

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Commits on Sep 1, 2022

• Fix a bug, float arithmetics must be used, not int

  pd3

  committed
  61691ab

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Commits on Aug 31, 2022

• Fix ref/qry sequence trimming for indel realignment

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  311486e

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Commits on Aug 18, 2022

• Long reads with --indels-2.0

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  cef69be

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Commits on Aug 11, 2022

• Functional --indels-2.0 prototype

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  2240ff3

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Commits on Jul 28, 2022

• First draft of read consensus creation functional

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  committed
  1e06536

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Commits on Jul 20, 2022

• Outline for read consensus creation

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  6b8eb04

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