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Commits on Jan 22, 2019

• Consistent hint for the distance matrix

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Commits on Jan 11, 2019

• Add .readwrite.write to the new API

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Commits on Jan 4, 2019

• Fix upper limit of Bonferroni adjusted p-values to 1.0

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Commits on Jul 15, 2018

• Use http to avoid http/https 301 redirection and save 1sec.

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• Add libhdf5 to conda, in case that any source package (like tables fpr Python 3.7) uses libhdf.

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• Fix PYTHON_VERSION to in travis installer

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Commits on Jul 13, 2018

• Add missing import

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Commits on Jul 1, 2018

• Add DCA integration

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Commits on Jun 28, 2018

• Fix sc.write() for files without extensions

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Commits on May 13, 2018

• Strip lines in soft.gz

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  1247336

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• Fix for soft.gz

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  3900f72

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• Write gz/bz2 support to error message too

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  7db64ad

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• txt.gz is also supported

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  cad3ecb

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• Allow gz and bz2 extensions for text formats

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  6e789a6

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Commits on May 6, 2018

• Fix UMAP metric_kwds parameter

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Commits on Apr 27, 2018

• Exclude nans from normalized dispersion vector

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Commits on Apr 16, 2018

• Do not use paga is use_paga is False

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Commits on Apr 1, 2018

• Fix diffusion maps

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Commits on Mar 27, 2018

• Fix NoneType check in plotting/anndata.py

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Commits on Mar 26, 2018

• Fix dpt_scatter file saving.

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Commits on Feb 22, 2018

• Style fix for init argument

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  4186c30

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• Fix variable name in moignard15

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  4bf37a3

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• Add missing import

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• Add 3d projection and component specification for UMAP

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  c5cde8b

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• Add UMAP visualization support.

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  2079e36

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Commits on Feb 21, 2018

• Clarify ambiguous help string of recompute argument in pca

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Commits on Jan 15, 2018

• Fix weight assignment in igraph constructor

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Commits on Jan 12, 2018

• Fix module path of download_progress and create dir correctly.

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