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moved biocro test data / settings to extdata folder
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,138 @@ | ||
| <?xml version="1.0"?> | ||
| <pecan> | ||
| <outdir>/tmp/out/run/</outdir> | ||
| <rundir>/tmp/out/run/</rundir> | ||
| <pfts> | ||
| <pft> | ||
| <name>biocro.saof</name> | ||
| <outdir>/tmp/out/saof/</outdir> | ||
| <constants> | ||
| <canopyParms> | ||
| <Sp>1.3</Sp> | ||
| <SpD>0.001</SpD> | ||
| <nlayers>40</nlayers> | ||
| <kd>0.0</kd> | ||
| <chi.l>1.02</chi.l> | ||
| <heightFactor>5</heightFactor> | ||
| </canopyParms> | ||
| <nitroParms> | ||
| <iLeafN>2.0</iLeafN> | ||
| <kLN>0.5</kLN> | ||
| <Vmax.b1>0.0</Vmax.b1> | ||
| <alpha.b1>0.0</alpha.b1> | ||
| <kpLN>0.174</kpLN> | ||
| <lnb0>-5</lnb0> | ||
| <lnb1>18</lnb1> | ||
| <lnFun>0</lnFun> | ||
| <minln>80</minln> | ||
| <maxln>80</maxln> | ||
| <daymaxln>80</daymaxln> | ||
| </nitroParms> | ||
| <photoParms> | ||
| <vmax>39</vmax> | ||
| <alpha>0.04</alpha> | ||
| <kparm>0.7</kparm> | ||
| <theta>0.83</theta> | ||
| <beta>0.93</beta> | ||
| <Rd>0.0</Rd> | ||
| <Catm>380</Catm> | ||
| <b0>0.03</b0> | ||
| <b1>6.1</b1> | ||
| <UPPERTEMP>42</UPPERTEMP> | ||
| <LOWERTEMP>15</LOWERTEMP> | ||
| </photoParms> | ||
| <soilParms> | ||
| <phi1>0.01</phi1> | ||
| <phi2>0.83</phi2> | ||
| <iWatCont>0.0</iWatCont> | ||
| <soilType>6</soilType> | ||
| <soilLayers>1</soilLayers> | ||
| <soilDepths>1.0</soilDepths> | ||
| <hydrDist>0</hydrDist> | ||
| <wsFun>0</wsFun> | ||
| <scsf>1.0</scsf> | ||
| <transResp>5000000</transResp> | ||
| <leafPotTh>-800</leafPotTh> | ||
| <rfl>1.7</rfl> | ||
| <rsec>0.2</rsec> | ||
| <rsdf>0.44</rsdf> | ||
| <optiontocalculaterootdepth>0</optiontocalculaterootdepth> | ||
| <rootfrontvelocity>0.5</rootfrontvelocity> | ||
| </soilParms> | ||
| <seneParms> | ||
| <senLeaf>1400</senLeaf> | ||
| <senStem>10000</senStem> | ||
| <senRoot>0</senRoot> | ||
| <senRhizome>10000</senRhizome> | ||
| <leafremobilizafraction>0.0</leafremobilizafraction> | ||
| <rootturnover>0.2</rootturnover> | ||
| <leafturnover>1.38</leafturnover> | ||
| </seneParms> | ||
| <SugarPhenoParms> | ||
| <TT0>200</TT0> | ||
| <TTseed>800</TTseed> | ||
| <Tmaturity>6000</Tmaturity> | ||
| <Rd>0.8</Rd> | ||
| <Alm>0.32</Alm> | ||
| <Arm>0.08</Arm> | ||
| <Clstem>0.05</Clstem> | ||
| <Ilstem>0.0</Ilstem> | ||
| <Cestem>0.02</Cestem> | ||
| <Iestem>15</Iestem> | ||
| <Clsuc>0.01</Clsuc> | ||
| <Ilsuc>25</Ilsuc> | ||
| <Cesuc>0.02</Cesuc> | ||
| <Iesuc>45</Iesuc> | ||
| </SugarPhenoParms> | ||
| </constants> | ||
| </pft> | ||
| </pfts> | ||
| <database> | ||
| <userid>bety</userid> | ||
| <passwd>bety</passwd> | ||
| <name>bety</name> | ||
| <location>localhost</location> | ||
| </database> | ||
| <meta.analysis> | ||
| <iter>3000</iter> | ||
| <random.effects>FALSE</random.effects> | ||
| </meta.analysis> | ||
| <ensemble> | ||
| <size>10</size> | ||
| </ensemble> | ||
| <sensitivity.analysis> | ||
| <quantiles> | ||
| <sigma>3</sigma> | ||
| <sigma>2</sigma> | ||
| <sigma>1</sigma> | ||
| <sigma>0</sigma> | ||
| <sigma>-1</sigma> | ||
| <sigma>-2</sigma> | ||
| <sigma>-3</sigma> | ||
| </quantiles> | ||
| <variable>Stem</variable> | ||
| <start.year>2004</start.year> | ||
| <end.year>2004</end.year> | ||
| </sensitivity.analysis> | ||
| <model> | ||
| <name>BIOCRO</name> | ||
| <id></id> | ||
| </model> | ||
| <run> | ||
| <site> | ||
| <id>288</id> | ||
| <name>Sapelo Island</name> | ||
| <lat>31.40</lat> | ||
| <lon>-81.37</lon> | ||
| <met>NULL</met> | ||
| </site> | ||
| <folder>/tmp/out/run/</folder> | ||
| <start.date>2004-01-01 06:00:00</start.date> | ||
| <end.date>2005-12-31 05:59:00</end.date> | ||
| <host>R | ||
| <name>localhost</name> | ||
| <rundir>/tmp/out/run/</rundir> | ||
| <outdir>/tmp/out/run/</outdir> | ||
| </host> | ||
| </run> | ||
| </pecan> |
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