add the location of the stix index

mchowdh200 · Jul 7, 2022 · f913a7f · f913a7f
1 parent 009d581
commit f913a7f
Showing 1 changed file with 7 additions and 2 deletions.
diff --git a/conf/stix_1kg_dels.yaml b/conf/stix_1kg_dels.yaml
@@ -1,4 +1,9 @@
-stix_index: '/home/much8161/data/stix/1kg/alt_sort_b'
-stix_db: '/home/much8161/data/stix/1kg/1kg.ped.db'
+# path to where the stix index lives
+stix_index_dir: /home/much8161/data/stix/1kg
+
+# just the names of the stix index and db
+stix_index: 'alt_sort_b'
+stix_db: '1kg.ped.db'
+
 vcf: "/home/much8161/data/1kg/vcf/ALL.wgs.integrated_sv_map_v2.20130502.svs.genotypes.vcf.gz"
 outdir: "/home/much8161/data/1kg/stix_output"