codePaused should be set if manually called

If pause is called manually, codePaused should be set regardless of whether the game is currently paused or not. This would fix issues where a developer might not want the game to automatically resume when the screen regains focus.

src/core/Game.js

@@ -857,23 +857,23 @@ Object.defineProperty(Phaser.Game.prototype, "paused", {
             if (this._paused === false)
             {
                 this._paused = true;
-                this._codePaused = true;
                 this.sound.setMute();
                 this.time.gamePaused();
                 this.onPause.dispatch(this);
             }
+            this._codePaused = true;
         }
         else
         {
             if (this._paused)
             {
                 this._paused = false;
-                this._codePaused = false;
                 this.input.reset();
                 this.sound.unsetMute();
                 this.time.gameResumed();
                 this.onResume.dispatch(this);
             }
+            this._codePaused = false;
         }
 
     }