minor changes

infostop/__init__.py

@@ -4,8 +4,9 @@
 This package implements stop location detection using Infomap.
 """
 
+from .detect import label_trace
 from .detect import best_partition
-from .detect import run_infomap
+from .detect import label_distance_matrix
 
 name = "infostop"
 

infostop/detect.py

@@ -1,6 +1,11 @@
 import numpy as np
+import warnings
 from infostop import utils
 
+def best_partition(coords, r1=10, r2=10, label_singleton=False, min_staying_time=300, max_time_between=86400, distance_function=utils.haversine, return_intervals=False, min_size=2):
+    warnings.warn("`best_partition` is deprecated and will be removed in a future version. Instead use `label_trace`.")
+    return label_trace(coords, r1, r2, label_singleton, min_staying_time, max_time_between, distance_function, return_intervals, min_size)
+
 def label_trace(coords, r1=10, r2=10, label_singleton=False, min_staying_time=300, max_time_between=86400, distance_function=utils.haversine, return_intervals=False, min_size=2):
     """Infer best stop-location labels from stationary points using infomap.
 

infostop/utils.py

@@ -215,7 +215,7 @@ def infomap_communities(nodes, edges):
         for k, v in infomapSimple.getModules().items()
     ])
 
-def distance_matrix(stop_events, distance_function):
+def distance_matrix(stop_events, distance_function=haversine):
     """Compute distance matrix between list of points.
 
     Input