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Update .gitlab-ci.yml
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TomKellyGenetics committed Jul 30, 2019
1 parent 856a434 commit 6093633
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2 changes: 1 addition & 1 deletion .gitlab-ci.yml
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Expand Up @@ -57,7 +57,7 @@ test2:
script: convert.sh
- echo "test file inputs"
- bash convert.sh -t "icell8" -r "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0" \
- -- file "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001" \
- -- file "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001"
- echo "test multiple lanes"
- bash convert.sh -t "Nadia" -r "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0" \
- --read1 "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001_R1_001.fastq.gz" \
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