Fix typos in run.sh and README.md

PiperOrigin-RevId: 308848949
mmrech · Apr 28, 2020 · 0797e0b · 0797e0b
1 parent a8e876b
commit 0797e0b
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 4 deletions.
diff --git a/cell_mixer/README.md b/cell_mixer/README.md
@@ -100,7 +100,7 @@ AnnData has to be generate by first generating the data in csv, then by running
 the `convert.py` script.
 
 ```bash
-Rsript cell_mixer.R \
+Rscript cell_mixer.R \
 --data_path=$DATA_PATH \
 --name=mixture \
 --format=csv \

diff --git a/cell_mixer/requirements.txt b/cell_mixer/requirements.txt
@@ -6,7 +6,6 @@ natsort>=7.0.1
 numpy>=1.18.3
 packaging>=20.3
 pandas>=1.0.3
-pkg-resources>=0.0.0
 pyparsing>=2.4.7
 python-dateutil>=2.8.1
 pytz>=2019.3

diff --git a/cell_mixer/run.sh b/cell_mixer/run.sh
@@ -39,13 +39,13 @@ R -q -e 'BiocManager::install("DropletUtils")'
 DATA_PATH=/tmp/data
 bash cell_mixer/fetch_data.sh $DATA_PATH
 
-Rsript cell_mixer.R \
+Rscript cell_mixer.R \
 --data_path=$DATA_PATH \
 --name=mixture \
 --format=csv \
 --b_cells=500 \
 --naive_t=500
 
 python3 -m cell_mixer.converter \
---input_csv=mixture \
+--input_csv_prefix=mixture \
 --format=anndata