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  • fxTools Public

    A toolset for processing sequences in FASTA/Q formats

    Rust 2 GNU General Public License v3.0 Updated Jan 22, 2025
  • paf2dotplot Public

    Draw a dot plot from a paf alignment

    R 25 4 GNU General Public License v3.0 Updated Dec 20, 2024
  • moold Public

    Updated Sep 21, 2024
  • A simple and lightweight parallel task engine

    Python 35 5 GNU General Public License v3.0 Updated Aug 12, 2024
  • hifiasm2txt Public

    A small tool to convert hifiasm bin files to text format.

    Rust 5 GNU General Public License v3.0 Updated Jul 11, 2024
  • kseq-rs Public

    A FASTA/FASTQ format parser library

    Rust 20 2 MIT License Updated Mar 1, 2024
  • hh Public

    Quickly save useful bash commands

    Rust 4 1 GNU General Public License v3.0 Updated Mar 16, 2023
  • fastat Public archive

    Ultrafast to get statistics from fasta and fastq files

    Rust 2 MIT License Updated Mar 13, 2023
  • map2ava Public

    Convert read-to-ref mapping to read-vs-read overlapping

    Rust GNU General Public License v3.0 Updated Aug 10, 2022
  • minimap2-nd Public

    Forked from lh3/minimap2

    A versatile pairwise aligner for genomic and spliced nucleotide sequences

    C Other Updated Jun 13, 2022
  • rust binding to edlib

    C++ Updated May 24, 2022
  • FASTA files of chromosomes and genes, gff files for gene models.

    Perl 9 8 Updated Jan 30, 2019