SAM-2603 Cleanup Samigo project

- move samigo shared deploy jars to the newer sakai shared deploy
    OkiOSID
    commons-math
- remove standalone
- remove unused dirs and files from build
- reorganize the samigo-app, it produces the same exact war but
    is now better organized
- remove samigo-archive/sam-handlers in favor of samigo-import
- citations was also deploying OkiOSID

citations/citations-api/api/pom.xml

@@ -41,7 +41,6 @@
     <dependency>
       <groupId>OKI</groupId>
       <artifactId>OkiOSID</artifactId>
-      <version>2.0</version>
     </dependency>
   </dependencies>
   <build>

citations/citations-impl/impl/pom.xml

@@ -59,7 +59,6 @@
     <dependency>
       <groupId>OKI</groupId>
       <artifactId>OkiOSID</artifactId>
-      <version>2.0</version>
     </dependency>
     <dependency>
       <groupId>commons-logging</groupId>

citations/citations-osid/web2bridge/pom.xml

@@ -42,7 +42,6 @@
     <dependency>
       <groupId>OKI</groupId>
       <artifactId>OkiOSID</artifactId>
-      <version>2.0</version>
     </dependency>
     <dependency>
       <groupId>zing</groupId>

citations/citations-osid/xserver/pom.xml

@@ -45,7 +45,6 @@
     <dependency>
       <groupId>OKI</groupId>
       <artifactId>OkiOSID</artifactId>
-      <version>2.0</version>
     </dependency>
 <!--${sakai.ehcache.groupId}${sakai.ehcache.artifactId}${sakai.ehcache.version}-->
   </dependencies>

citations/pom.xml

@@ -23,7 +23,6 @@
     <module>citations-osid/xserver</module>
     <module>citations-impl/impl</module>
     <module>citations-impl/pack</module>
-    <module>citations-shared-deploy</module>
   </modules>
 
   <dependencyManagement>

deploy/shared/pom.xml

@@ -240,5 +240,19 @@
 			<version>${sakai.jackson.version}</version>
 			<scope>compile</scope>
 		</dependency>
+
+        <!-- Samigo shared dependencies -->
+        <dependency>
+            <groupId>org.apache.commons</groupId>
+            <artifactId>commons-math</artifactId>
+            <version>${sakai.commons-math.version}</version>
+            <scope>compile</scope>
+        </dependency>
+        <dependency>
+            <groupId>OKI</groupId>
+            <artifactId>OkiOSID</artifactId>
+            <version>${sakai.okiosid.version}</version>
+            <scope>compile</scope>
+        </dependency>
     </dependencies>
 </project>

master/pom.xml

@@ -85,6 +85,7 @@
     <sakai.commons.lang3.version>3.4</sakai.commons.lang3.version>
     <sakai.commons-logging.version>1.2</sakai.commons-logging.version>
     <sakai.commons.fileupload.version>1.3.1</sakai.commons.fileupload.version>
+    <sakai.commons-math.version>2.2</sakai.commons-math.version>
     <sakai.ehcache.groupId>net.sf.ehcache</sakai.ehcache.groupId>
     <sakai.ehcache.artifactId>ehcache-core</sakai.ehcache.artifactId>
     <sakai.ehcache.version>2.6.6</sakai.ehcache.version>
@@ -121,6 +122,7 @@
     <sakai.log4j.version>1.2.17</sakai.log4j.version>
     <sakai.slf4j.version>1.7.5</sakai.slf4j.version>
     <sakai.poi.version>3.12</sakai.poi.version>
+    <sakai.okiosid.version>2.0</sakai.okiosid.version>
     <rsfutil.version>0.8.1-SNAPSHOT</rsfutil.version>
     <sakairsf.components.version>11-SNAPSHOT</sakairsf.components.version>
     <sakairsf.version>11-SNAPSHOT</sakairsf.version>
@@ -554,6 +556,12 @@
         <version>${sakai.commons.lang3.version}</version>
         <scope>provided</scope>
       </dependency>
+      <dependency>
+        <groupId>org.apache.commons</groupId>
+        <artifactId>commons-math</artifactId>
+        <version>${sakai.commons-math.version}</version>
+        <scope>provided</scope>
+      </dependency>
       <dependency>
         <groupId>zing</groupId>
         <artifactId>cql-java-0.7</artifactId>
@@ -746,7 +754,7 @@
       <dependency>
         <groupId>OKI</groupId>
         <artifactId>OkiOSID</artifactId>
-        <version>2.0</version>
+        <version>${sakai.okiosid.version}</version>
         <scope>provided</scope>
       </dependency>
       <dependency>