To initialize your local repository using the OMNIROM trees to build TWRP, use a command like this:
repo init -u git://github.com/neporood/twrp_omni.git -b twrp-6.0
Then to sync up:
repo sync
Then to build:
cd <source-dir>; . build/envsetup.sh; lunch omni_<device>-eng; mka recoveryimage