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Showing results

Command line scientific data management tool

Rust 217 10 Updated Nov 4, 2024

Fixes macOS Preview garbled annotations

Rust 384 18 Updated Feb 23, 2024

6.790 | Machine Learning | Draft Site/Notes

TeX 8 5 Updated Dec 18, 2024

Publication-quality network visualisations in python

Python 695 42 Updated Oct 28, 2024

18.337 - Parallel Computing and Scientific Machine Learning

Jupyter Notebook 230 42 Updated Apr 24, 2023

Accelerated, Python-only, single-cell integration benchmarking metrics

Python 53 12 Updated Jan 13, 2025

A plugin for reading and annotating PDFs and EPUBs in obsidian.

JavaScript 1,543 71 Updated Jan 8, 2024

A python package for modeling, persisting and visualizing causal graphs embedded in knowledge graphs.

Python 46 5 Updated Dec 15, 2023

Statistical Rethinking Course for Jan-Mar 2023

R 2,237 250 Updated Nov 28, 2023

Fast, modular and reproducible generation of publication quality scientific figures and movies with only a few lines of code.

Python 14 1 Updated Dec 9, 2024

Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

C++ 117 17 Updated Jan 10, 2025

A helpful 5-page machine learning cheatsheet to assist with exam reviews, interview prep, and anything in-between.

TeX 5,033 721 Updated Mar 15, 2023

Zotero plugin to manage your attachments: automatically rename, move, and attach PDFs (or other files) to Zotero items, sync PDFs from your Zotero library to your (mobile) PDF reader (e.g. an iPad,…

Java 4,093 286 Updated Apr 16, 2024

This is the GitHub repository for the lecture notes of Probability Theory taught at Imperial College London.

TeX 6 4 Updated Feb 23, 2023

💌 Things I've learned about writing good READMEs.

7,043 414 Updated Aug 21, 2022

A set of useful perceptually uniform colormaps for plotting scientific data

Python 696 54 Updated Sep 10, 2024

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

Python 698 75 Updated Jan 8, 2025

A tool to find sequencing data and metadata from public databases.

Python 560 47 Updated Aug 13, 2024

Hypermodern Python Cookiecutter

Python 1,836 237 Updated May 18, 2024

https://www.sc-best-practices.org

Jupyter Notebook 820 198 Updated Jan 18, 2025

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

Python 432 59 Updated Dec 29, 2024

Collections of library structure and sequence of popular single cell genomic methods

HTML 443 95 Updated Dec 10, 2024

Clapeyron provides a framework for the development and use of fluid-thermodynamic models, including SAFT, cubic, activity, multi-parameter, and COSMO-SAC.

Julia 221 53 Updated Jan 18, 2025

Bionic ReadingTool - is fully open-source, making it accessible to everyone. Convert Text into Better Way to Read Faster. ReadingTool can significantly increase reading speed by up to 30%.

TypeScript 465 29 Updated Feb 7, 2024

Wiki.js | A modern and powerful wiki app built on Node.js

Vue 25,410 2,815 Updated Jan 1, 2025

Extensible Surrogate Potential of Ab initio Learned and Optimized by Message-passing Algorithm 🍹https://arxiv.org/abs/2010.01196

Python 222 26 Updated Nov 18, 2024

Magnificent app which corrects your previous console command.

Python 89,267 3,591 Updated Jul 19, 2024

MDAnalysis is a Python library to analyze molecular dynamics simulations.

Python 1,360 667 Updated Jan 17, 2025

Statistical Rethinking course winter 2022

R 4,115 443 Updated Mar 15, 2022
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