Get Tests/EndToEndTests/Examples/Speech/TIMIT/Write*/ to work again

Note: WriteScaledLogLike produces results of varying checksum on
Windows, where our hardware varies greater. If we see similar effects
on Linux or WriteBottleneck as well, we need to rework.

.gitattributes

@@ -40,6 +40,10 @@ run-test-common text eol=lf
 run-timit-test-common text eol=lf
 make_binary_drop_linux text eol=lf
 
+# Used from Unix / Cygwin 'md5sum -c', needs to have LF line endings:
+Tests/EndToEndTests/Examples/Speech/TIMIT/WriteBottleneck/expected_output_md5sum.*.txt eol=lf
+Tests/EndToEndTests/Examples/Speech/TIMIT/WriteScaledLogLike/expected_output_md5sum.*.txt eol=lf
+
 Makefile text
 *.sln text
 *.vcxproj text

Source/Readers/HTKMLFReader/htkfeatio.h

@@ -298,11 +298,9 @@ class htkfeatwriter : protected htkfeatio
 #else
         W.close(numframes);
 #endif
-#ifdef _WIN32 // BUGBUG: and on Linux??
         // rename to final destination
         // (This would only fail in strange circumstances such as accidental multiple processes writing to the same file.)
         renameOrDie(tmppath, path);
-#endif
     }
 };
 

Tests/EndToEndTests/Examples/Speech/TIMIT/WriteBottleneck/expected_output_md5sum.linux.txt

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+4f63ca66723a75834ed8939f594fccfb *./test/dr7/mnjm0/test-dr7-mnjm0-sx410.mfc
+6cec502b127b30ea40311d1a9a58c2f5 *./test/dr7/mnjm0/test-dr7-mnjm0-sx140.mfc
+65c111893d10f46ed18f45f59fb60313 *./test/dr7/fdhc0/test-dr7-fdhc0-si929.mfc
+bb5272d699df1fff8476df82a1941a05 *./test/dr7/fdhc0/test-dr7-fdhc0-si1559.mfc
+a9f1875151fbcb5e1a77c70d56ac02e8 *./test/dr7/fdhc0/test-dr7-fdhc0-sx389.mfc
+47877b0ce7a53ba55cd03ef662ab296c *./test/dr7/fdhc0/test-dr7-fdhc0-sx209.mfc
+cd5683f4317be70ecc7edb85e03a2b41 *./test/dr7/fdhc0/test-dr7-fdhc0-sx29.mfc
+714632d9a93ee3956eb17ca7542982ef *./test/dr7/fdhc0/test-dr7-fdhc0-sx119.mfc
+066e0ac779857a82089c549b816a9f5f *./test/dr7/fdhc0/test-dr7-fdhc0-sx299.mfc
+78dfe2142557fa9e3e2f7aa9302dceaa *./test/dr7/fdhc0/test-dr7-fdhc0-si2189.mfc
+caa94c192bc7a50e8e61bdeee521ef36 *./test/dr8/mpam0/test-dr8-mpam0-si1961.mfc
+07db167513208cee4c1b411f792d45aa *./test/dr8/mpam0/test-dr8-mpam0-sx109.mfc
+ef1e18220d2b045db3b565a89f41862c *./test/dr8/mpam0/test-dr8-mpam0-si1189.mfc
+ce63e2ea8d2471575349f6ea5e29ef39 *./test/dr8/mpam0/test-dr8-mpam0-sx199.mfc
+fc1f878df5f41ee4da25fd5b170de2c0 *./test/dr8/mpam0/test-dr8-mpam0-sx289.mfc
+427fbdce271a32de2ecde17a2eaf2393 *./test/dr8/mpam0/test-dr8-mpam0-sx19.mfc
+6ea73a2d7d9881f3654fc4d8b4728284 *./test/dr8/mpam0/test-dr8-mpam0-sx379.mfc
+aa8cd3b0ffcba1b60dee4cdf1c73c0a3 *./test/dr8/mpam0/test-dr8-mpam0-si1819.mfc
+336a87b7bcb22988e6c459a7d2bd9fb6 *./test/dr8/fmld0/test-dr8-fmld0-sx295.mfc
+aaa15bf148fddeaf7c687fe37c532af6 *./test/dr8/fmld0/test-dr8-fmld0-si2185.mfc
+4ab7ffa45c7d8e1c8e6cb679f3f22d9f *./test/dr8/fmld0/test-dr8-fmld0-sx25.mfc
+3347cc4cbdf7e999d2e15d360d12f188 *./test/dr8/fmld0/test-dr8-fmld0-sx115.mfc
+d7be1922fbf83de89de5d76b05927b56 *./test/dr8/fmld0/test-dr8-fmld0-sx205.mfc
+300c85eb63700d38a3518dffb0fa8e08 *./test/dr8/fmld0/test-dr8-fmld0-si925.mfc
+f13cdb3d0afaad48cfb0105d98701811 *./test/dr8/fmld0/test-dr8-fmld0-si822.mfc
+24c1eaf2380bbeec55e7435be5c0e188 *./test/dr8/fmld0/test-dr8-fmld0-sx385.mfc
+164ecfe5bedb0a4d8682e6606e5c4891 *./test/dr8/mjln0/test-dr8-mjln0-sx189.mfc
+1dd0c3d14cb3ba48ca5f0ba3c66109de *./test/dr8/mjln0/test-dr8-mjln0-sx99.mfc
+9911c198820b31a8e97ba8931c5d3c33 *./test/dr8/mjln0/test-dr8-mjln0-sx9.mfc
+3c2414a28bca4f7d3a069cc04d7b86f5 *./test/dr8/mjln0/test-dr8-mjln0-si819.mfc
+89eef9eab97147ce9434f92771071ddb *./test/dr8/mjln0/test-dr8-mjln0-si1449.mfc
+0360af7de66eea332f9a70ccda238064 *./test/dr8/mjln0/test-dr8-mjln0-si2079.mfc
+d8df80ab15fa18c538b47fa91335aa96 *./test/dr8/mjln0/test-dr8-mjln0-sx279.mfc
+647cb59b377be3ff50120c004bc45b01 *./test/dr8/mjln0/test-dr8-mjln0-sx369.mfc

Tests/EndToEndTests/Examples/Speech/TIMIT/WriteBottleneck/run-test

@@ -17,16 +17,34 @@ cp -R $DataSourceDir/* $DataDir || exit $?
 cntkrun TIMIT_WriteBottleneck.cntk "$CntkArguments"
 ExitCode=$?
 
-# TODO investigate test failures
-## Compare the output files
-#OutputDir=$DataDir/bottleneck
-#
-#cd $OutputDir && md5sum --quiet -c $TEST_DIR/expected_output.txt
-#if [ $? != 0 ]; then
-#  echo Error: Output files are different.
-#  $ExitCode = 1
-#fi
-#echo MD5 check succeeded.
+if [ $ExitCode == 0 ]; then
+  echo Write succeeded.
+
+  # Restore DataDir prior to modification through cntkrun (on Cygwin)
+  DataDir=$TEST_RUN_DIR/TestData
+
+  # Compare the output files
+  OutputDir=$DataDir/bottleneck
+
+  if [ "$OS" == "Windows_NT" ]; then
+      ExpectedOutputFile=$TEST_DIR/expected_output_md5sum.windows.txt
+  else
+      ExpectedOutputFile=$TEST_DIR/expected_output_md5sum.linux.txt
+  fi
+
+  # TODO need to watch this for a while. If this turns out to be
+  # non-deterministic we need to disable this / find a different output
+  # validation.
+  cd $OutputDir && md5sum --quiet -c $ExpectedOutputFile
+  ExitCode=$?
+  if [ $ExitCode == 0 ]; then
+    echo MD5 check succeeded.
+  else
+    # Using explicit path to find to disambiguate from find.exe on Windows
+    /usr/bin/find $OutputDir -type f -print0 | xargs -0 md5sum
+    echo Error: Output files are different. More info above.
+  fi
+fi
 
 # Delete the test data
 rm -rf $DataDir