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Northomics

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  1. pepFunk pepFunk Public

    Peptide-centric functional enrichment tool

    R 4 2

  2. MetaProfiler MetaProfiler Public

    Calculates the local false discovery rate of heavy peptide features and performs , taxonomic, functional, phylogenetic, and time series analysis of microbiome dynamic studies.

    R 3

  3. iMetaShiny iMetaShiny Public

    R 1

  4. bin bin Public

    Helper scripts used in analysis pipelines

    Python

  5. R_tutorials R_tutorials Public

    Introductory R tutorials for TMM3009 Rotations 2021 at University of Ottawa

    HTML

  6. MetaProClust-MS1 MetaProClust-MS1 Public

    MetaProClust-MS1: Gut microbiome metaproteomics clustering using rapid MS1 profiling

    R

Repositories

Showing 10 of 17 repositories
  • Peptide_Abundance_Correlations Public

    This repository contains the code and analysis scripts used in the paper: Zhongzhi Sun, Zhibin Ning, Qing Wu et al., Peptide abundance correlations in metaproteomics enhance taxonomic and functional analysis of the human gut microbiome (DOI: [to be added]).

    northomics/Peptide_Abundance_Correlations’s past year of commit activity
    R 0 MIT 0 0 0 Updated Mar 7, 2025
  • northomics.github.io Public

    lab website

    northomics/northomics.github.io’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Sep 22, 2024
  • spectra_entropy Public

    tool to calculate spectra_entropy to measure the complexity of ms spectra

    northomics/spectra_entropy’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 4, 2024
  • MetaDIA Public
    northomics/MetaDIA’s past year of commit activity
    0 MIT 0 0 0 Updated Mar 2, 2024
  • RapidAIM_protocol_dataset Public

    Demo for data analysis for the RapidAIM 2.0 workflow

    northomics/RapidAIM_protocol_dataset’s past year of commit activity
    0 0 0 0 Updated Aug 8, 2022
  • MetaProClust-MS1 Public

    MetaProClust-MS1: Gut microbiome metaproteomics clustering using rapid MS1 profiling

    northomics/MetaProClust-MS1’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jun 28, 2022
  • pepFunk Public

    Peptide-centric functional enrichment tool

    northomics/pepFunk’s past year of commit activity
    R 4 GPL-3.0 2 1 0 Updated Jun 1, 2022
  • iMetaLab_paper Public

    Dataset_iMetaLab_paper

    northomics/iMetaLab_paper’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 28, 2022
  • iMetaShiny Public
    northomics/iMetaShiny’s past year of commit activity
    R 1 0 1 0 Updated Mar 11, 2022
  • websites Public

    metalab websites related

    northomics/websites’s past year of commit activity
    HTML 0 MIT 0 2 0 Updated Mar 11, 2022
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