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| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
| @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix owl: <http://www.w3.org/2002/07/owl#> . | ||
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| @prefix ca: <http://floss.syr.edu/ontologies/2008/4/contentAnalysis.owl#> . | ||
| @prefix doap: <http://usefulinc.com/ns/doap#> . | ||
| @prefix vivo: <http://vivoweb.org/ontology/core#> . | ||
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| @prefix bioj: <http://james.howison.name/ontologies/bio-journal-sample#> . | ||
| @prefix citec: <http://james.howison.name/ontologies/software-citation-coding#> . | ||
| @prefix bioj-cited: <http://james.howison.name/ontologies/bio-journal-sample-citation#> . | ||
| @prefix pmcid: <https://www.ncbi.nlm.nih.gov/pmc/articles/> . | ||
| @prefix pmcid-cited: <http://james.howison.name/ontologies/pmcid-journal-sample-citation#> . | ||
| @prefix dc: <http://dublincore.org/documents/2012/06/14/dcmi-terms/> . | ||
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| # https://howisonlab.github.io/softcite-pdf-files/pdf-files/pmc_oa_files/PMC3337979.pdf | ||
| pmcid:PMC3337979 rdf:type bioj:article ; | ||
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| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:coded_no_in_text_mentions ; | ||
| citec:isPresent false; # true/false | ||
| ] ; | ||
| ] ; | ||
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| citec:has_in_text_mention pmcid:PMC3337979_MS01 ; # name in text mention like pmcid:PMC3028497_JC01, no quotes | ||
| citec:has_in_text_mention pmcid:PMC3337979_MS02 ; | ||
| . | ||
| pmcid:PMC3337979_MS01 rdf:type citec:in_text_mention ; # use in text mention name | ||
| citec:full_quote """Data were analysed using the GraphPad Prism 4.""" ; # use triple quotes | ||
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| citec:on_pdf_page 8 ; # integer | ||
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| citec:spans_pages false ; # true/false | ||
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| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:mention_type ; | ||
| rdfs:label """software""" ; # put one in triple quotes | ||
| ca:certainty 10 ; # integer | ||
| ca:memo """GraphPad Prism 4 is a program developed by GraphPad Software.""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:software_was_used ; | ||
| citec:isPresent true; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:software_name ; | ||
| citec:isPresent true ; # true/false | ||
| rdfs:label """GraphPad Prism""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:version_number ; | ||
| citec:isPresent true ; # true/false | ||
| rdfs:label """4""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:version_date ; | ||
| citec:isPresent false ; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:url ; | ||
| citec:isPresent false ; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:creator ; | ||
| citec:isPresent false ; # true/false | ||
| ] ; | ||
| ] ; | ||
| . | ||
| pmcid:PMC3337979_MS02 rdf:type citec:in_text_mention ; # use in text mention name | ||
| citec:full_quote """Data were acquired and analysed using the pClamp software (version 8.0; Axon Instruments).""" ; # use triple quotes | ||
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| citec:on_pdf_page 8 ; # integer | ||
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| citec:spans_pages false ; # true/false | ||
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| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:mention_type ; | ||
| rdfs:label """software""" ; # put one in triple quotes | ||
| ca:certainty 10 ; # integer | ||
| ca:memo """it says software""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:software_was_used ; | ||
| citec:isPresent true; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:software_name ; | ||
| citec:isPresent true ; # true/false | ||
| rdfs:label """pClamp""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:version_number ; | ||
| citec:isPresent true ; # true/false | ||
| rdfs:label """version 8.0""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:version_date ; | ||
| citec:isPresent false ; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:url ; | ||
| citec:isPresent false ; # true/false | ||
| ] ; | ||
| ] ; | ||
| ca:isTargetOf | ||
| [ rdf:type ca:CodeApplication ; | ||
| ca:hasCoder "mjsong1201" ; | ||
| ca:appliesCode [ rdf:type citec:creator ; | ||
| citec:isPresent true ; # true/false | ||
| rdfs:label """Axon Instruments""" ; # use triple quotes | ||
| ] ; | ||
| ] ; | ||
| . |
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