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Intervene: a tool for intersection and visualization of multiple genomic region and gene sets

Python 136 28 Updated Oct 28, 2023

Command-line sampling profiler for macOS and Linux

Rust 2,485 59 Updated Dec 16, 2024
Jupyter Notebook 41 6 Updated Oct 19, 2024

A collection of loading indicators animated with CSS

CSS 19,361 1,808 Updated Aug 1, 2020

Apache Arrow is the universal columnar format and multi-language toolbox for fast data interchange and in-memory analytics

C++ 14,751 3,575 Updated Dec 20, 2024

Official repository of "SAMURAI: Adapting Segment Anything Model for Zero-Shot Visual Tracking with Motion-Aware Memory"

Python 5,962 353 Updated Dec 5, 2024

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Rust 1,620 207 Updated Dec 9, 2024

Open Source Data Management Software

C++ 454 140 Updated Dec 17, 2024
Shell 6 5 Updated Dec 16, 2024

Nextflow pipeline to analyze ONT UMI Sequencing data

Python 3 1 Updated Dec 4, 2024

Basic workflow for ATAC-seq analysis

R 70 33 Updated Feb 23, 2024

The statistical language R compiled to WebAssembly via Emscripten, for use in web browsers and Node.

TypeScript 891 71 Updated Dec 16, 2024

Quick serialization of R objects

C 406 19 Updated Sep 30, 2024

ms-font, wps-font. etc.

Shell 33 7 Updated Oct 16, 2019

Continuous profiling for analysis of CPU and memory usage, down to the line number and throughout time. Saving infrastructure cost, improving performance, and increasing reliability.

TypeScript 4,207 218 Updated Dec 20, 2024

ShellCheck, a static analysis tool for shell scripts

Haskell 36,628 1,782 Updated Dec 14, 2024

A list of web-based interactive biological data visualizations.

177 16 Updated Apr 2, 2024

Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

JavaScript 185 44 Updated Dec 19, 2024

An emacs mode for quarto: https://quarto.org

Emacs Lisp 134 14 Updated Jan 5, 2024
Nextflow 10 3 Updated Jun 7, 2024

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and …

C++ 223 24 Updated Dec 6, 2024
JavaScript 1,988 3,756 Updated Nov 12, 2024

A Shiny app showing the types of session information stored in Shiny

R 9 5 Updated Apr 13, 2022

Examples to implement asynchronous programming in Shiny ✨

R 65 7 Updated Sep 3, 2024

Awesome resources for learning more about Apache Arrow

84 2 Updated Dec 13, 2023

The duckdb R package

R 140 24 Updated Dec 17, 2024

An example of running webR in a Vue.js 3 application.

Vue 6 Updated Nov 3, 2023

An extensible framework for linking databases and interactive views.

JavaScript 892 61 Updated Dec 17, 2024

cloc counts blank lines, comment lines, and physical lines of source code in many programming languages.

Perl 19,899 1,024 Updated Dec 14, 2024
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