Test tutorials #482
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| name: "Test tutorials" | |
| on: | |
| push: | |
| branches: | |
| - "master" | |
| pull_request: | |
| branches: | |
| - "master" | |
| schedule: | |
| - cron: "0 0 * * 0" # Every Sunday at midnight | |
| jobs: | |
| tutorial-1: | |
| runs-on: "ubuntu-latest" | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: "Check out" | |
| uses: actions/checkout@v2 | |
| - name: "Install dependencies with Mamba" | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test | |
| environment-file: devtools/conda-envs/test-tutorials.yml | |
| miniforge-variant: Mambaforge | |
| python-version: 3.7 # Mimics Google Colab | |
| - name: "List conda packages" | |
| run: conda list | |
| - name: "Convert the tutorial" | |
| run: | | |
| jupyter nbconvert --to python --stdout tutorials/openmm-torch-nnpops.ipynb > test.py | |
| sed -i '/condacolab/d' test.py # Remove conda-colab | |
| sed -i 's#&> /dev/null##g' test.py # Remove the output redirection | |
| cat test.py | |
| - name: "Run the tutorial" | |
| run: ipython test.py |