*/*: sync with upstream

Taken from: HardenedBSD

archivers/peazip/Makefile

@@ -4,8 +4,8 @@ PORTNAME=	peazip
 PORTVERSION=	7.0.1
 PORTREVISION=	2
 CATEGORIES=	archivers
-PKGNAMESUFFIX=	${LAZARUS_PKGNAMESUFFIX}
 MASTER_SITES=	https://github.com/giorgiotani/PeaZip/releases/download/${PORTVERSION}/
+PKGNAMESUFFIX=	${LAZARUS_PKGNAMESUFFIX}
 DISTNAME=	${PORTNAME}-${PORTVERSION}.src
 
 MAINTAINER=	[email protected]

archivers/peazip/pkg-descr

@@ -6,4 +6,4 @@ convert archives, split / join files, strong encryption, encrypted password
 manager, secure delete, find duplicate files, compute hash, export job
 definition as script to automate backup / restore.
 
-WWW: http://www.peazip.org
+WWW: https://www.peazip.org/

archivers/quazip/Makefile

@@ -3,7 +3,7 @@
 
 PORTNAME=	quazip
 DISTVERSIONPREFIX=	v
-DISTVERSION=	0.9
+DISTVERSION=	0.9.1
 CATEGORIES=	archivers
 PKGNAMESUFFIX=	-qt5
 

archivers/quazip/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1588315994
-SHA256 (stachenov-quazip-v0.9_GH0.tar.gz) = 377ebf77630e4cff7411fe149cb342e10f3be55ba123cc0b1ee09a25fc3faa06
-SIZE (stachenov-quazip-v0.9_GH0.tar.gz) = 155764
+TIMESTAMP = 1590411942
+SHA256 (stachenov-quazip-v0.9.1_GH0.tar.gz) = 5d36b745cb94da440432690050e6db45b99b477cfe9bc3b82fd1a9d36fff95f5
+SIZE (stachenov-quazip-v0.9.1_GH0.tar.gz) = 155775

astro/gpsd/Makefile

@@ -12,7 +12,7 @@ COMMENT=	Daemon that monitors one or more GPSes attached to a host computer
 LICENSE=	BSD3CLAUSE
 LICENSE_FILE=	${WRKSRC}/COPYING
 
-USES=		cpe pathfix pkgconfig python:3.6+ scons shebangfix
+USES=		cpe pathfix pkgconfig python:3.6+ scons:python2 shebangfix
 CPE_VENDOR=	gpsd_project
 USE_LDCONFIG=	yes
 USE_RC_SUBR=	gpsd

astro/mkgmap/Makefile

@@ -2,7 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	mkgmap
-PORTVERSION=	r4486
+PORTVERSION=	r4499
 CATEGORIES=	astro converters java
 MASTER_SITES=	http://www.mkgmap.org.uk/download/ \
 		http://mirror.amdmi3.ru/distfiles/

astro/mkgmap/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1589041254
-SHA256 (mkgmap-r4486.tar.gz) = 76bba6ab61a5531de04dd265fe3f101f01bfe38222f7bd3ce2505ba89eb8736a
-SIZE (mkgmap-r4486.tar.gz) = 3444786
+TIMESTAMP = 1590360613
+SHA256 (mkgmap-r4499.tar.gz) = 5d8f8aad387768821fa343278320e1f349b9599697657aa07d9b273f3ae11344
+SIZE (mkgmap-r4499.tar.gz) = 3445587

audio/ardour/Makefile

@@ -31,7 +31,7 @@ LIB_DEPENDS=	libaubio.so:audio/aubio \
 		libsamplerate.so:audio/libsamplerate \
 		libsndfile.so:audio/libsndfile
 
-USES=		cpe gettext gnome pkgconfig scons tar:bzip2
+USES=		cpe gettext gnome pkgconfig scons:python2 tar:bzip2
 MAKE_ARGS+=	SYSLIBS=yes PREFIX=${PREFIX} NLS=yes
 CFLAGS+=	-I${LOCALBASE}/include -DHAVE_AUBIO4
 USE_GNOME=	atk atkmm cairo cairomm gdkpixbuf2 glib20 glibmm gtk20 gtkmm24 \

audio/jamulus/Makefile

@@ -1,7 +1,7 @@
 # $FreeBSD$
 
 PORTNAME=	jamulus
-DISTVERSION=	3.5.3
+DISTVERSION=	3.5.4
 CATEGORIES=	audio
 MASTER_SITES=	SF/llcon/${NAME}/${DISTVERSION}/
 DISTNAME=	${NAME}-${PORTVERSION}

audio/jamulus/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1590134666
-SHA256 (Jamulus-3.5.3.tar.gz) = f19d3a5bdd482462ee014a5e52a97c305419b66ca406bd5bd565bdf829e378de
-SIZE (Jamulus-3.5.3.tar.gz) = 1839088
+TIMESTAMP = 1590426559
+SHA256 (Jamulus-3.5.4.tar.gz) = 06be648ea42a45ff03b18ee6489205f19d3fb4ff0e17b564d7802724804bc330
+SIZE (Jamulus-3.5.4.tar.gz) = 1672841

audio/lilv/Makefile

@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	lilv
-PORTVERSION=	0.24.4
-PORTREVISION=	1
+PORTVERSION=	0.24.6
 CATEGORIES=	audio
 MASTER_SITES=	http://download.drobilla.net/
 
@@ -14,7 +13,10 @@ LICENSE=	ISCL
 LICENSE_FILE=	${WRKSRC}/COPYING
 
 BUILD_DEPENDS=	lv2>=1.14.0:audio/lv2
-LIB_DEPENDS=	libserd-0.so:devel/serd libsord-0.so:devel/sord libsratom-0.so:audio/sratom libsndfile.so:audio/libsndfile
+LIB_DEPENDS=	libserd-0.so:devel/serd \
+		libsndfile.so:audio/libsndfile \
+		libsord-0.so:devel/sord \
+		libsratom-0.so:audio/sratom
 RUN_DEPENDS=	lv2>=1.14.0:audio/lv2
 
 USES=		pkgconfig python:build tar:bzip2 waf

audio/lilv/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1534708824
-SHA256 (lilv-0.24.4.tar.bz2) = c33b84b7a6e8e8fffb412fbcd6f69e59ca297ef3e29d829249b4ccc94f634438
-SIZE (lilv-0.24.4.tar.bz2) = 252209
+TIMESTAMP = 1590393198
+SHA256 (lilv-0.24.6.tar.bz2) = 5f544cf79656e0782a03a2cc7ab1d31a93f36d71d4187bd427ade8d7b55370dc
+SIZE (lilv-0.24.6.tar.bz2) = 541765

audio/lilv/pkg-plist

@@ -9,6 +9,7 @@ include/lilv-0/lilv/lilvmm.hpp
 lib/liblilv-0.so
 lib/liblilv-0.so.0
 lib/liblilv-0.so.%%VERSION%%
+%%PYTHON_SITELIBDIR%%/lilv.py
 libdata/pkgconfig/lilv-0.pc
 share/man/man1/lv2apply.1.gz
 share/man/man1/lv2info.1.gz

audio/liquidsfz/Makefile

@@ -19,8 +19,6 @@ GNU_CONFIGURE=	yes
 USE_GITHUB=	yes
 GH_ACCOUNT=	swesterfeld
 
-CXXFLAGS+=	-Duint=unsigned -Dregister=registerx
-
 PLIST_FILES=	bin/liquidsfz \
 		include/liquidsfz.hh \
 		lib/libliquidsfz.a \
@@ -29,7 +27,13 @@ PLIST_FILES=	bin/liquidsfz \
 		lib/lv2/liquidsfz.lv2/manifest.ttl \
 		libdata/pkgconfig/liquidsfz.pc
 
+.include <bsd.port.pre.mk>
+
+.if ${CHOSEN_COMPILER_TYPE} == clang
+CXXFLAGS+=	-Duint=unsigned -Dregister=registerx
+.endif
+
 post-install:
 	@${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/lv2/liquidsfz.lv2/liquidsfz_lv2.so
 
-.include <bsd.port.mk>
+.include <bsd.port.post.mk>

audio/mixxx/Makefile

@@ -33,7 +33,7 @@ LIB_DEPENDS=	libchromaprint.so:audio/chromaprint \
 		libprotobuf.so:devel/protobuf \
 		liblilv-0.so:audio/lilv
 
-USES=		compiler:c++11-lang gl iconv qt:5 pkgconfig scons xorg
+USES=		compiler:c++11-lang gl iconv qt:5 pkgconfig scons:python2 xorg
 USE_XORG=	x11
 USE_GL=		gl glu
 USE_GITHUB=	yes

audio/mixxx21/Makefile

@@ -32,7 +32,7 @@ LIB_DEPENDS=	libchromaprint.so:audio/chromaprint \
 		libtag.so:audio/taglib \
 		libprotobuf.so:devel/protobuf
 
-USES=		compiler:c++11-lang gl iconv qt:5 pkgconfig scons xorg
+USES=		compiler:c++11-lang gl iconv qt:5 pkgconfig scons:python2 xorg
 USE_XORG=	x11
 USE_GL=		gl glu
 USE_GITHUB=	yes

audio/sratom/Makefile

@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	sratom
-PORTVERSION=	0.6.2
-PORTREVISION=	1
+PORTVERSION=	0.6.4
 CATEGORIES=	audio
 MASTER_SITES=	http://download.drobilla.net/
 
@@ -14,7 +13,8 @@ LICENSE=	ISCL
 LICENSE_FILE=	${WRKSRC}/COPYING
 
 BUILD_DEPENDS=	lv2>=1.14.0:audio/lv2
-LIB_DEPENDS=	libserd-0.so:devel/serd libsord-0.so:devel/sord
+LIB_DEPENDS=	libserd-0.so:devel/serd \
+		libsord-0.so:devel/sord
 RUN_DEPENDS=	lv2>=1.14.0:audio/lv2
 
 USES=		pkgconfig python:build tar:bzip2 waf

audio/sratom/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1534708844
-SHA256 (sratom-0.6.2.tar.bz2) = 0a514a55d6b6cb7b5d6f32d1dcb78a1e6e54537fa22fce533e4ef6adf240e853
-SIZE (sratom-0.6.2.tar.bz2) = 229079
+TIMESTAMP = 1590203959
+SHA256 (sratom-0.6.4.tar.bz2) = 146c8f14b8902ac3c8fa8c2e0a014eb8a38fab60090c5adbfbff3e3b7c5c006e
+SIZE (sratom-0.6.4.tar.bz2) = 339707

biology/gatk/Makefile

@@ -11,6 +11,8 @@ COMMENT=	Variant discovery in high-throughput sequencing data
 LICENSE=	BSD3CLAUSE
 LICENSE_FILE=	${WRKSRC}/LICENSE.TXT
 
+BROKEN_FreeBSD_12_powerpc64=	fails to build: String index out of range: -1
+
 BUILD_DEPENDS=	gradle62:devel/gradle62
 
 USES=		gettext-runtime
@@ -52,7 +54,6 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
 	@cd ${DEPS_CACHE_DIR} && ${TAR} xzf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX}
 .endif
 
-
 do-build:
 	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle62 \
 		--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \

cad/ifcopenshell/Makefile

@@ -17,7 +17,7 @@ BUILD_DEPENDS=	nlohmann-json>0:devel/nlohmann-json
 LIB_DEPENDS=	libboost_system.so:devel/boost-libs \
 		libTKernel.so:cad/opencascade
 
-USES=		cmake eigen:3 gnome
+USES=		cmake compiler:c++11-lang eigen:3 gnome
 USE_GNOME=	libxml2
 USE_LDCONFIG=	yes
 USE_GITHUB=	yes

cad/netgen/Makefile

@@ -2,69 +2,44 @@
 # $FreeBSD$
 
 PORTNAME=	netgen
-PORTVERSION=	5.3.1
-PORTREVISION=	11
+PORTVERSION=	6.2.2004
+DISTVERSIONPREFIX=	v
 CATEGORIES=	cad
-#MASTER_SITES=	SF/netgen-mesher/netgen-mesher/${PORTVERSION:C|\.[[:digit:]]+$||}/
-MASTER_SITES=	http://faculty.missouri.edu/~stephen/
 
 MAINTAINER=	[email protected]
 COMMENT=	Automatic 3D tetrahedral mesh generator
 
-LIB_DEPENDS=	libTix8.4.3.so:x11-toolkits/tix \
-		libtogl.so:graphics/togl
+LICENSE=	GPLv2
+LICENSE_FILE=	${WRKSRC}/LICENSE
 
-OCC_BROKEN=	Does not compile because of issues with cad/opencascade
+BUILD_DEPENDS=	${PYTHON_PKGNAMEPREFIX}pytest>=0:devel/py-pytest@${PY_FLAVOR}
 
-USE_LDCONFIG=	yes
-USES=		gl gmake jpeg libtool localbase tk:tea xorg
-USE_GL=		gl glu
-USE_XORG=	x11 xmu xi
-MAKE_JOBS_UNSAFE=	yes
-CPPFLAGS+=	-isystem ${LOCALBASE}/lib/Togl-1.7
-CONFIGURE_ARGS=	--enable-jpeglib
-INSTALL_TARGET=	install-strip
-
-FETCH_BEFORE_ARGS+=	-o ${DISTDIR}/${DISTNAME}${EXTRACT_SUFX}
-
-OPTIONS_DEFINE=		OCC FFMPEG
-OCC_DESC=		Compile with OpenCascade geometry kernel
-FFMPEG_DESC=		video recording with FFmpeg
-OPTIONS_DEFAULT=	# OCC
-
-BROKEN_sparc64=		internal gcc error (Bug 23159)
+USES=		cmake python tcl tk gl xorg
 
-OCC_LIB_DEPENDS=	libTKernel.so:cad/opencascade
-OCC_CXXFLAGS=		-DOCCGEOMETRY -DHAVE_CONFIG_H -D${ARCH} -I${LOCALBASE}/include/OpenCASCADE
-OCC_CONFIGURE_ON=	--enable-occ
+USE_GITHUB=	yes
+GH_ACCOUNT=	NGSolve
+GH_PROJECT=	netgen:1 pybind11:2
+GH_TAGNAME=	v${PORTVERSION}:1 v2.4.3:2
+GH_SUBDIR=	external_dependencies/pybind11:2
 
-FFMPEG_LIB_DEPENDS=	libavcodec.so:multimedia/ffmpeg
-FFMPEG_CONFIGURE_ON=	--enable-ffmpeg
-
-MACHINE=	${OPSYS:tu}
-
-SUB_LIST=	PREFIX=${PREFIX}
-SUB_FILES=	pkg-message
-MAKE_ENV=	TK_VER=${TK_VER} TCL_VER=${TCL_VER}	\
-		TCL_INCLUDEDIR="${TCL_INCLUDEDIR}"	\
-		TK_INCLUDEDIR="${TK_INCLUDEDIR}"	\
-		MACHINE=${MACHINE} MAKE=${MAKE_CMD}
+USE_GL=		gl glu
+USE_XORG=	x11 xmu xi
+USE_LDCONFIG=	yes
 
-post-patch:
-	@${REINPLACE_CMD} -e '/ngdir/s,"\.","${PREFIX}/bin",' \
-		${WRKSRC}/ng/ng.tcl \
-		${WRKSRC}/ng/ngappinit.cpp
+CFLAGS+=	-I${LOCALBASE}/include -I${TK_INCLUDEDIR}/generic -I${TK_INCLUDEDIR}/unix
+CXXFLAGS+=	-I${LOCALBASE}/include -I${TK_INCLUDEDIR}/generic -I${TK_INCLUDEDIR}/unix
 
-post-install:
-#	copy some additional headers for build cad/salome-netgenplugin
-	${MKDIR} ${STAGEDIR}${DATADIR}/include
-	${SH} ${FILESDIR}/netgen_copy_include_for_salome ${WRKSRC} ${STAGEDIR}${PREFIX}
-	${LN} ${STAGEDIR}${PREFIX}/lib/libnglib.so ${STAGEDIR}${PREFIX}/lib/libnglib.so.1
+OPTIONS_DEFINE=	JPEG MPEG CGNS
 
-.include <bsd.port.pre.mk>
+JPEG_DESC=	Enable snapshots using jpeg
+MPEG_DESC=	Enable recording with FFmpeg
+CGNS_DESC=	Enable CGNS file read/write support
 
-.if ${OPSYS} == FreeBSD && ${OSVERSION} >= 1300014
-BROKEN=			does not build with recent versions of FreeBSD
-.endif
+JPEG_CMAKE_BOOL=	USE_JPEG
+JPEG_USES=		jpeg
+MPEG_CMAKE_BOOL=	USE_MPEG
+MPEG_LIB_DEPENDS=	libavcodec.so:multimedia/libav
+CGNS_CMAKE_BOOL=	USE_CGNS
+CGNS_LIB_DEPENDS=	libcgns.so:science/cgnslib
 
-.include <bsd.port.post.mk>
+.include <bsd.port.mk>

cad/netgen/distinfo

@@ -1,2 +1,7 @@
-SHA256 (netgen-5.3.1.tar.gz) = cb97f79d8f4d55c00506ab334867285cde10873c8a8dc783522b47d2bc128bf9
-SIZE (netgen-5.3.1.tar.gz) = 1857185
+TIMESTAMP = 1590458542
+SHA256 (NGSolve-netgen-v6.2.2004_GH0.tar.gz) = a41111470baf65090066df85957aea8afdcb568a18f1915946228f3918d91928
+SIZE (NGSolve-netgen-v6.2.2004_GH0.tar.gz) = 3245092
+SHA256 (NGSolve-netgen-v6.2.2004_GH0.tar.gz) = a41111470baf65090066df85957aea8afdcb568a18f1915946228f3918d91928
+SIZE (NGSolve-netgen-v6.2.2004_GH0.tar.gz) = 3245092
+SHA256 (NGSolve-pybind11-v2.4.3_GH0.tar.gz) = 1eed57bc6863190e35637290f97a20c81cfe4d9090ac0a24f3bbf08f265eb71d
+SIZE (NGSolve-pybind11-v2.4.3_GH0.tar.gz) = 571127