*/*: sync with upstream

Taken from: HardenedBSD

archivers/kf5-karchive/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1536000740
-SHA256 (KDE/frameworks/5.50.0/karchive-5.50.0.tar.xz) = 5420a1d94f699415aa3587ca44f631be62c7c8bcac5a813dd70099d7b66701ca
-SIZE (KDE/frameworks/5.50.0/karchive-5.50.0.tar.xz) = 439876
+TIMESTAMP = 1539410397
+SHA256 (KDE/frameworks/5.51.0/karchive-5.51.0.tar.xz) = 7667430451d0530b38532ee023e645d5ff66f2078352d39129f803dd7d0328b3
+SIZE (KDE/frameworks/5.51.0/karchive-5.51.0.tar.xz) = 439912

archivers/py-zstandard/Makefile

@@ -1,8 +1,7 @@
 # $FreeBSD$
 
 PORTNAME=	zstandard
-DISTVERSION=	0.9.1
-PORTREVISION=	2
+DISTVERSION=	0.10.1
 CATEGORIES=	archivers python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
@@ -15,11 +14,11 @@ LICENSE=	BSD2CLAUSE
 BROKEN_powerpc64=	fails to build: cffi.error.CDefError: parse error
 
 BUILD_DEPENDS=	${PYTHON_PKGNAMEPREFIX}cffi>=1.8.0:devel/py-cffi@${PY_FLAVOR}
-#LIB_DEPENDS=	libzstd.so:archivers/zstd # system-zstd is broken, see comment below
+LIB_DEPENDS=	libzstd.so:archivers/zstd
 
 USES=		localbase python
 USE_PYTHON=	distutils autoplist
-#PYDISTUTILS_BUILDARGS=	--system-zstd # broken: https://github.com/indygreg/python-zstandard/issues/52
+PYDISTUTILS_BUILDARGS=	--system-zstd
 
 post-install:
 	@cd ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR} && ${STRIP_CMD} zstd.so _zstd_cffi.so

archivers/py-zstandard/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1528180596
-SHA256 (zstandard-0.9.1.tar.gz) = 59c7d6f1f85cebb5124abb50d8ec281c5311e0812e18785e28b197cf1515dd3b
-SIZE (zstandard-0.9.1.tar.gz) = 558984
+TIMESTAMP = 1539926027
+SHA256 (zstandard-0.10.1.tar.gz) = b9e21eb96328ae594a9a9ffb48424ecf758d0dbffaed2a508aa6679cb2cf658c
+SIZE (zstandard-0.10.1.tar.gz) = 611517

archivers/quazip/Makefile

@@ -24,7 +24,7 @@ USES+=		qt:4
 USE_QT=		corelib moc_build network_build qmake_build rcc_build uic_build
 CMAKE_ARGS=	-DBUILD_WITH_QT4:BOOL=TRUE
 .  else
-USES+=		qt:5
+USES+=		compiler:c++11-lang qt:5
 USE_QT=		core buildtools_build qmake_build
 CMAKE_ARGS=	-DBUILD_WITH_QT4:BOOL=FALSE
 QTVER_SUFFIX=	5

audio/Makefile

@@ -731,6 +731,7 @@
     SUBDIR += ripit
     SUBDIR += ripperx
     SUBDIR += rkr-lv2
+    SUBDIR += rnnoise-nu
     SUBDIR += rosegarden
     SUBDIR += rplay
     SUBDIR += rsynth
@@ -787,6 +788,7 @@
     SUBDIR += spc2it
     SUBDIR += specimen
     SUBDIR += spectrogram
+    SUBDIR += speech-denoiser-lv2
     SUBDIR += speex
     SUBDIR += speexdsp
     SUBDIR += spek

audio/gxplugins-lv2/Makefile

@@ -3,9 +3,10 @@
 PORTNAME=	gxplugins
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.5
+PORTREVISION=	1
 CATEGORIES=	audio
-DIST_SUBDIR=	${PORTNAME}
 PKGNAMESUFFIX=	-lv2
+DIST_SUBDIR=	${PORTNAME}
 
 MAINTAINER=	[email protected]
 COMMENT=	Set of LV2 plugins from the guitarix project
@@ -21,8 +22,9 @@ USES=		compiler:c++11-lang gettext-runtime gmake gnome localbase pkgconfig
 USE_GITHUB=	yes
 GH_ACCOUNT=	brummer10
 GH_PROJECT=	GxPlugins.lv2
-USE_GNOME=	gtk20 glib20 gdkpixbuf2 atk cairo pango
+USE_GNOME=	glib20 atk cairo pango
 USE_XORG=	x11
+USE_BINUTILS=	yes # linking needs some GNU features, fails on 12 without this, see https://github.com/brummer10/GxPlugins.lv2/issues/9
 
 .for x in	GxAxisFace.lv2:c370e75 GxBottleRocket.lv2:8d1a914 GxDOP250.lv2:574b709 GxFz1b.lv2:d204796 GxFz1s.lv2:973d6f7 \
 		GxGuvnor.lv2:6082bcf GxHeathkit.lv2:bb73b24 GxHotBox.lv2:db17513 GxHyperion.lv2:9b91395 GxKnightFuzz.lv2:0d9518f \

audio/libopusenc/Makefile

@@ -1,7 +1,7 @@
 # $FreeBSD$
 
 PORTNAME=	libopusenc
-PORTVERSION=	0.2
+PORTVERSION=	0.2.1
 CATEGORIES=	audio
 MASTER_SITES=	MOZILLA/opus
 

audio/libopusenc/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1537972823
-SHA256 (libopusenc-0.2.tar.gz) = c79e95eeee43a0b965e9b2c59a243763a8f8b0a7e71441df2aa9084f6171c73a
-SIZE (libopusenc-0.2.tar.gz) = 388027
+TIMESTAMP = 1540058989
+SHA256 (libopusenc-0.2.1.tar.gz) = 8298db61a8d3d63e41c1a80705baa8ce9ff3f50452ea7ec1c19a564fe106cbb9
+SIZE (libopusenc-0.2.1.tar.gz) = 388071

audio/opus/Makefile

@@ -1,7 +1,7 @@
 # $FreeBSD$
 
 PORTNAME=	opus
-PORTVERSION=	1.2.1
+PORTVERSION=	1.3
 CATEGORIES=	audio
 MASTER_SITES=	MOZILLA/opus
 

audio/opus/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1498937290
-SHA256 (opus-1.2.1.tar.gz) = cfafd339ccd9c5ef8d6ab15d7e1a412c054bf4cb4ecbbbcc78c12ef2def70732
-SIZE (opus-1.2.1.tar.gz) = 1011070
+TIMESTAMP = 1540057767
+SHA256 (opus-1.3.tar.gz) = 4f3d69aefdf2dbaf9825408e452a8a414ffc60494c70633560700398820dc550
+SIZE (opus-1.3.tar.gz) = 1032750

audio/opus/pkg-plist

@@ -2,10 +2,11 @@ include/opus/opus.h
 include/opus/opus_custom.h
 include/opus/opus_defines.h
 include/opus/opus_multistream.h
+include/opus/opus_projection.h
 include/opus/opus_types.h
 lib/libopus.a
 lib/libopus.so
 lib/libopus.so.0
-lib/libopus.so.0.6.1
+lib/libopus.so.0.7.0
 libdata/pkgconfig/opus.pc
 share/aclocal/opus.m4

audio/rnnoise-nu/Makefile

@@ -0,0 +1,36 @@
+# $FreeBSD$
+
+PORTNAME=	rnnoise-nu
+DISTVERSION=	g20180916
+CATEGORIES=	audio
+
+MAINTAINER=	[email protected]
+COMMENT=	Recurrent neural network for audio noise reduction
+
+LICENSE=	BSD2CLAUSE
+LICENSE_FILE=	${WRKSRC}/COPYING
+
+USES=		autoreconf gmake libtool
+GNU_CONFIGURE=	yes
+CONFIGURE_ARGS=	--disable-static --disable-examples
+USE_GITHUB=	yes
+GH_ACCOUNT=	GregorR
+GH_TAGNAME=	2626930
+USE_LDCONFIG=	yes
+
+OPTIONS_DEFINE=	DOCS
+
+DOCS_CONFIGURE_ENABLE=	doc
+
+PORTDOCS=	* # API documentation feature is broken: https://github.com/xiph/rnnoise/issues/44
+
+PLIST_FILES=	include/rnnoise-nu.h \
+		lib/librnnoise-nu.so \
+		lib/librnnoise-nu.so.1 \
+		lib/librnnoise-nu.so.1.0.0 \
+		libdata/pkgconfig/rnnoise-nu.pc
+
+post-install-DOCS-on:
+	@${RM} ${STAGEDIR}${DOCSDIR}/COPYING
+
+.include <bsd.port.mk>

audio/rnnoise-nu/distinfo

@@ -0,0 +1,3 @@
+TIMESTAMP = 1540098308
+SHA256 (GregorR-rnnoise-nu-g20180916-2626930_GH0.tar.gz) = e63558d1a6269cc02ec078909f29f0a698e85d973ba86c16c5bbc50b5fb69f96
+SIZE (GregorR-rnnoise-nu-g20180916-2626930_GH0.tar.gz) = 830784

audio/rnnoise-nu/pkg-descr

@@ -0,0 +1,3 @@
+RNNoise is a noise suppression library based on a recurrent neural network.
+
+WWW: https://github.com/xiph/rnnoise

audio/shairport-sync/Makefile

@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	shairport-sync
-DISTVERSION=	3.2.1
-PORTREVISION=	1
+DISTVERSION=	3.2.2
 CATEGORIES=	audio
 
 MAINTAINER=	[email protected]
@@ -17,10 +16,11 @@ LIB_DEPENDS=	libavahi-client.so:net/avahi-app \
 		libpopt.so:devel/popt \
 		libsoxr.so:audio/libsoxr
 
-GNU_CONFIGURE=	yes
 USES=		autoreconf libtool pkgconfig ssl
-
 USE_GITHUB=	yes
+
+GNU_CONFIGURE=	yes
+
 GH_ACCOUNT=	mikebrady
 
 USE_RC_SUBR=	${PORTNAME}

audio/shairport-sync/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1531738955
-SHA256 (mikebrady-shairport-sync-3.2.1_GH0.tar.gz) = 1fe16856ec828704b086c571038a3b2eb907a3cf0a3847ed1b721b517554659d
-SIZE (mikebrady-shairport-sync-3.2.1_GH0.tar.gz) = 357628
+TIMESTAMP = 1540031760
+SHA256 (mikebrady-shairport-sync-3.2.2_GH0.tar.gz) = 4f1ee142b887842727ae0c310e21c83ea2386518e841a25c7ddb015d08b54eba
+SIZE (mikebrady-shairport-sync-3.2.2_GH0.tar.gz) = 359760

audio/speech-denoiser-lv2/Makefile

@@ -0,0 +1,29 @@
+# $FreeBSD$
+
+PORTNAME=	speech-denoiser
+DISTVERSION=	g20181007
+CATEGORIES=	audio
+PKGNAMESUFFIX=	-lv2
+
+MAINTAINER=	[email protected]
+COMMENT=	Speech denoise LV2 plugin based on RNNoise library
+
+LICENSE=	GPLv3
+LICENSE_FILE=	${WRKSRC}/LICENSE
+
+BUILD_DEPENDS=	lv2>0:audio/lv2
+LIB_DEPENDS=	librnnoise-nu.so:audio/rnnoise-nu
+
+USES=		localbase:ldflags meson pkgconfig
+USE_GITHUB=	yes
+GH_ACCOUNT=	lucianodato
+GH_TAGNAME=	04cfba9
+
+PLIST_FILES=	lib/lv2/sdenoise.lv2/manifest.ttl \
+		lib/lv2/sdenoise.lv2/sdenoise.so \
+		lib/lv2/sdenoise.lv2/sdenoise.ttl
+
+pre-configure:
+	@cd ${WRKSRC} && ${LN} -s _build build
+
+.include <bsd.port.mk>

audio/speech-denoiser-lv2/distinfo

@@ -0,0 +1,3 @@
+TIMESTAMP = 1540097529
+SHA256 (lucianodato-speech-denoiser-g20181007-04cfba9_GH0.tar.gz) = fecc2703d81bfb3cf6d348c226bfddcd3101c3c5a46daba29689569bfa53f493
+SIZE (lucianodato-speech-denoiser-g20181007-04cfba9_GH0.tar.gz) = 839640

audio/speech-denoiser-lv2/files/patch-meson.build

@@ -0,0 +1,20 @@
+--- meson.build.orig	2018-10-07 21:33:41 UTC
++++ meson.build
+@@ -10,7 +10,7 @@ src = 'src/sdenoise.c'
+ cc = meson.get_compiler('c')
+
+ #handling rnnoise static library
+-lib_rnnoise = cc.find_library('rnnoise-nu',dirs: meson.current_source_dir() + '/rnnoise/.libs/',required : true)
++lib_rnnoise = cc.find_library('rnnoise-nu',required : true)
+ inc_rnnoise = include_directories('rnnoise/include')
+
+ #dependencies for speech denoise
+@@ -25,7 +25,7 @@ endif
+ cflags = ['-msse','-msse2','-mfpmath=sse','-ffast-math','-fomit-frame-pointer','-fno-finite-math-only']
+
+ #install folder
+-install_folder = 'sdenoise.lv2'
++install_folder = 'lib/lv2/sdenoise.lv2'
+
+ #get the build operating system and configure install path and shared object extension
+ current_os = build_machine.system()

audio/speech-denoiser-lv2/pkg-descr

@@ -0,0 +1,7 @@
+A speech denoise LV2 plugin based on the modified Xiph's RNNoise library
+by GregorR.
+
+RNNoise is a library that uses deep learning to apply noise supression to audio
+sources with voice presence.
+
+WWW: https://github.com/lucianodato/speech-denoiser

benchmarks/nuttcp/Makefile

@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	nuttcp
-PORTVERSION=	7.3.2
-PORTREVISION=	1
+PORTVERSION=	8.2.2
 CATEGORIES=	benchmarks net
 MASTER_SITES=	http://nuttcp.net/nuttcp/beta/ http://nuttcp.net/nuttcp/latest/:latest
 DISTFILES=	${PORTNAME}-${PORTVERSION}.c ${NUTTSCPDISTFILE} ${PORTNAME}.8:latest examples.txt:latest LICENSE:latest README:latest
@@ -19,7 +18,7 @@ NO_WRKSUBDIR=	yes
 USES=		shebangfix
 SHEBANG_FILES=	nuttscp
 
-NUTTSCPVERSION=	2.2
+NUTTSCPVERSION=	2.3
 NUTTSCPDISTFILE=nuttscp-${NUTTSCPVERSION}
 
 OPTIONS_DEFINE=	NUTTSCP

benchmarks/nuttcp/distinfo

@@ -1,13 +1,13 @@
-TIMESTAMP = 1496757295
-SHA256 (nuttcp-7.3.2/nuttcp-7.3.2.c) = 4deb98a21bb8d2f75dff95436f85d616cdf321b50f29b2bf5f0ff9a0d42b0d62
-SIZE (nuttcp-7.3.2/nuttcp-7.3.2.c) = 265085
-SHA256 (nuttcp-7.3.2/nuttscp-2.2) = 0874f2f87b8def21bd3d1b18dab449e3d97648100d0c824af109eba897e2160d
-SIZE (nuttcp-7.3.2/nuttscp-2.2) = 28729
-SHA256 (nuttcp-7.3.2/nuttcp.8) = 7d133bcc293b24e9610a66e6fed933131a72865905c58585190f3756497a56f9
-SIZE (nuttcp-7.3.2/nuttcp.8) = 16157
-SHA256 (nuttcp-7.3.2/examples.txt) = eb94d5424880164cae4b4b5d8f4ab25299cb3396a32c4dcb136e9718c0844938
-SIZE (nuttcp-7.3.2/examples.txt) = 5933
-SHA256 (nuttcp-7.3.2/LICENSE) = ab15fd526bd8dd18a9e77ebc139656bf4d33e97fc7238cd11bf60e2b9b8666c6
-SIZE (nuttcp-7.3.2/LICENSE) = 17987
-SHA256 (nuttcp-7.3.2/README) = 7a4858e2e1863d5de64b4f559dc3f6061f535bd2901664073983359f034ad51c
-SIZE (nuttcp-7.3.2/README) = 5228
+TIMESTAMP = 1540060143
+SHA256 (nuttcp-8.2.2/nuttcp-8.2.2.c) = 8c5595bcd27c2fd66831be74c390df078cfb1870aa427f2511ac2586d236c8a1
+SIZE (nuttcp-8.2.2/nuttcp-8.2.2.c) = 288451
+SHA256 (nuttcp-8.2.2/nuttscp-2.3) = 9142f9b24ffe1cd5f3aacf3bf03e2a51061082f44502f555058532ab8f789cf4
+SIZE (nuttcp-8.2.2/nuttscp-2.3) = 28986
+SHA256 (nuttcp-8.2.2/nuttcp.8) = 7d133bcc293b24e9610a66e6fed933131a72865905c58585190f3756497a56f9
+SIZE (nuttcp-8.2.2/nuttcp.8) = 16157
+SHA256 (nuttcp-8.2.2/examples.txt) = eb94d5424880164cae4b4b5d8f4ab25299cb3396a32c4dcb136e9718c0844938
+SIZE (nuttcp-8.2.2/examples.txt) = 5933
+SHA256 (nuttcp-8.2.2/LICENSE) = ab15fd526bd8dd18a9e77ebc139656bf4d33e97fc7238cd11bf60e2b9b8666c6
+SIZE (nuttcp-8.2.2/LICENSE) = 17987
+SHA256 (nuttcp-8.2.2/README) = f819fceb91b3380fb638c89c96d7190be02f531f07fbd7e5c0020330a0f4d74a
+SIZE (nuttcp-8.2.2/README) = 5228

biology/hyphy/Makefile

@@ -1,7 +1,8 @@
 # $FreeBSD$
 
 PORTNAME=	hyphy
-DISTVERSION=	2.3.13
+DISTVERSION=	2.3.14-16
+DISTVERSIONSUFFIX=	-g3d88d3e6
 CATEGORIES=	biology
 
 MAINTAINER=	[email protected]
@@ -18,4 +19,6 @@ USES=		compiler:c++14-lang cmake:outsource localbase:ldflags ssl
 USE_GITHUB=	yes
 GH_ACCOUNT=	veg
 
+CMAKE_ON=	NOAVX
+
 .include <bsd.port.mk>

biology/hyphy/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1527024059
-SHA256 (veg-hyphy-2.3.13_GH0.tar.gz) = 29b72574302c98d38a92d5316b9283caa80a54c3e74c5e278c5bc9ae3d3df499
-SIZE (veg-hyphy-2.3.13_GH0.tar.gz) = 7910770
+TIMESTAMP = 1540036335
+SHA256 (veg-hyphy-2.3.14-16-g3d88d3e6_GH0.tar.gz) = 459cd0a261ae5f31dc230847acbd294a4dc1e17fa69ef0c3db173c2b8808c826
+SIZE (veg-hyphy-2.3.14-16-g3d88d3e6_GH0.tar.gz) = 8041349

biology/hyphy/pkg-plist

@@ -237,7 +237,7 @@ lib/hyphy/TemplateBatchFiles/PositiveSelectionLI.bf
 lib/hyphy/TemplateBatchFiles/ProteinAnalyses/README_relative_prot_rates.md
 lib/hyphy/TemplateBatchFiles/ProteinAnalyses/relative_prot_rates.bf
 lib/hyphy/TemplateBatchFiles/QuickSelectionDetection-MEME-internal.bf
-lib/hyphy/TemplateBatchFiles/QuickSelectionDetection.bf
+lib/hyphy/TemplateBatchFiles/Deprecated/QuickSelectionDetection.bf
 lib/hyphy/TemplateBatchFiles/QuickSelectionDetectionMF.bf
 lib/hyphy/TemplateBatchFiles/RateClassCounter.bf
 lib/hyphy/TemplateBatchFiles/ReduceDataSetMatrix.bf
@@ -267,6 +267,8 @@ lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX-SRV.bf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/SLAC.bf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/Simulators/BUSTED.bf
+lib/hyphy/TemplateBatchFiles/SelectionAnalyses/Simulators/FADE.bf
+lib/hyphy/TemplateBatchFiles/SelectionAnalyses/aBSREL-NS.bf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/grid_compute.ibf
 lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
@@ -504,6 +506,7 @@ lib/hyphy/TemplateBatchFiles/libv3/models/rate_variation.bf
 lib/hyphy/TemplateBatchFiles/libv3/stats.bf
 lib/hyphy/TemplateBatchFiles/libv3/tasks/alignments.bf
 lib/hyphy/TemplateBatchFiles/libv3/tasks/ancestral.bf
+lib/hyphy/TemplateBatchFiles/libv3/tasks/bayesgraph.ibf
 lib/hyphy/TemplateBatchFiles/libv3/tasks/estimators.bf
 lib/hyphy/TemplateBatchFiles/libv3/tasks/genetic_code.bf
 lib/hyphy/TemplateBatchFiles/libv3/tasks/mpi.bf

cad/verilog-mode.el/pkg-descr

@@ -6,4 +6,4 @@ Recent versions allow you to insert AUTOS in non-AUTO designs, so IP
 interconnect can be easily modified. You can also expand Verilog-2001 ".*"
 instantiations, to see what ports will be connected by simulators.
 
-WWW: http://www.veripool.org/wiki/verilog-mode
+WWW: https://www.veripool.org/wiki/verilog-mode

databases/Makefile

@@ -725,6 +725,14 @@
     SUBDIR += postgresql-repmgr
     SUBDIR += postgresql-tds_fdw
     SUBDIR += postgresql-zhparser
+    SUBDIR += postgresql11-client
+    SUBDIR += postgresql11-contrib
+    SUBDIR += postgresql11-docs
+    SUBDIR += postgresql11-pgtcl
+    SUBDIR += postgresql11-plperl
+    SUBDIR += postgresql11-plpython
+    SUBDIR += postgresql11-pltcl
+    SUBDIR += postgresql11-server
     SUBDIR += postgresql10-client
     SUBDIR += postgresql10-contrib
     SUBDIR += postgresql10-docs

databases/firebird25-server/Makefile

@@ -46,6 +46,7 @@ CONFIGURE_ARGS=	--with-system-icu \
 CONFIGURE_ENV+=	PTHREAD_LIBS="-lpthread" \
 		ac_cv_header_atomic_ops_h="no" \
 		ac_cv_lib_atomic_ops_main="no"
+CPPFLAGS+=	-DU_NOEXCEPT= # For USE_CXXSTD=gnu++98
 
 LOCALSTATEDIR=	/var/db/firebird
 CONFDIR=	etc/firebird