Repositories list

• Practice-Sandbox

  Public
  Project to play in :) Go nuts!

  2•0•1•0•Updated Aug 28, 2024Aug 28, 2024

• DevLData

  Public
  0•0•0•0•Updated Jan 30, 2023Jan 30, 2023

• CPHI-PROJECTS

  Public
  TSQL

  •1•0•0•0•Updated Nov 22, 2022Nov 22, 2022

• mimic-code

  Public
  MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

  Jupyter Notebook

  •

  MIT License

  •1.5k•0•0•0•Updated Aug 25, 2022Aug 25, 2022

• clinicalBERT

  Public
  repository for Publicly Available Clinical BERT Embeddings

  Python

  •

  MIT License

  •140•0•0•0•Updated Aug 25, 2022Aug 25, 2022

• layout-parser

  Public
  A Unified Toolkit for Deep Learning Based Document Image Analysis

  Python

  •

  Apache License 2.0

  •482•0•0•0•Updated Feb 6, 2022Feb 6, 2022

• BioWordVec

  Public
  Python

  •

  Other

  •29•0•0•0•Updated Jan 20, 2022Jan 20, 2022

• acronyms

  Public
  A list of VA acronyms

  Shell

  •48•0•0•0•Updated Nov 2, 2021Nov 2, 2021

• clinicalBERT-1

  Public
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)

  Jupyter Notebook

  •101•0•0•0•Updated May 10, 2021May 10, 2021

• GloVe

  Public
  GloVe model for distributed word representation

  C

  •

  Apache License 2.0

  •1.5k•0•0•0•Updated Mar 7, 2021Mar 7, 2021

• fastText_java

  Public
  Java port of c++ version of facebook fasttext

  Java

  •

  Other

  •80•0•0•0•Updated Feb 14, 2021Feb 14, 2021

• ETL-CMS

  Public
  Workproducts to ETL CMS datasets into OMOP Common Data Model

  Python

  •

  Apache License 2.0

  •54•0•0•0•Updated Jan 28, 2021Jan 28, 2021

• ttk

  Public
  Tarsqi Toolkit

  Python

  •

  Apache License 2.0

  •10•0•0•0•Updated Jan 5, 2021Jan 5, 2021

• inception

  Public
  INCEpTION provides a semantic annotation platform offering intelligent annotation assistance and knowledge management.

  Java

  •

  Apache License 2.0

  •156•0•0•0•Updated Nov 25, 2020Nov 25, 2020

• tesseract

  Public
  Tesseract Open Source OCR Engine (main repository)

  C++

  •

  Apache License 2.0

  •9.7k•0•0•0•Updated Nov 12, 2020Nov 12, 2020

• aline-mimic-iii

  Public
  PLpgSQL

  •

  MIT License

  •2•0•0•0•Updated Nov 12, 2020Nov 12, 2020

• JFastText

  Public
  Java interface for fastText

  Java

  •

  Other

  •98•0•0•0•Updated Oct 20, 2020Oct 20, 2020

• deeplearning4j

  Public
  Eclipse Deeplearning4j, ND4J, DataVec and more - deep learning & linear algebra for Java/Scala with GPUs + Spark

  Java

  •

  Apache License 2.0

  •3.8k•0•0•0•Updated Aug 19, 2020Aug 19, 2020

• fastText

  Public
  Library for fast text representation and classification.

  HTML

  •

  MIT License

  •4.7k•0•0•0•Updated Aug 16, 2020Aug 16, 2020

• CommonDataModel

  Public
  Definition and DDLs for the OMOP Common Data Model (CDM)

  PLpgSQL

  •

  Apache License 2.0

  •457•0•0•0•Updated May 27, 2020May 27, 2020

• ehost

  Public
  eHOST: The Extensible Human Oracle Suite of Tools an open source annotation tool (With UX improvements)

  Java

  •4•0•0•0•Updated Feb 29, 2020Feb 29, 2020

• curl_toan

  Public archive
  Java

  •1•0•0•0•Updated Feb 27, 2020Feb 27, 2020

• act

  Public
  Tcl

  •2•0•0•0•Updated Jan 31, 2020Jan 31, 2020

• memory-measurer

  Public
  Automatically exported from code.google.com/p/memory-measurer

  Java

  •

  Apache License 2.0

  •82•0•0•0•Updated Jan 29, 2020Jan 29, 2020

• tgist-taxonomy

  Public
  Roff

  •2•0•0•0•Updated Jan 29, 2020Jan 29, 2020

• spv2

  Public
  Science-parse version 2

  Python

  •22•0•0•0•Updated Sep 20, 2019Sep 20, 2019

• science-parse

  Public
  Science Parse parses scientific papers (in PDF form) and returns them in structured form.

  Java

  •

  Apache License 2.0

  •87•0•0•0•Updated Sep 17, 2019Sep 17, 2019

• stateless4j

  Public
  Lightweight Java State Machine

  Java

  •

  Apache License 2.0

  •189•0•0•0•Updated Sep 14, 2019Sep 14, 2019

• ultrajson

  Public
  Ultra fast JSON decoder and encoder written in C with Python bindings

  C

  •

  Other

  •367•0•0•0•Updated Jul 24, 2019Jul 24, 2019

• ultramysql

  Public
  A fast MySQL driver written in pure C/C++ for Python. Compatible with gevent through monkey patching.

  C

  •

  Other

  •95•0•0•0•Updated Jul 8, 2019Jul 8, 2019