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OUSAMG

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  1. vep vep Public

    Perl 1

  2. bedtools2 bedtools2 Public

    Forked from arq5x/bedtools2

    A powerful toolset for genome arithmetic.

    C++

  3. bcbio.variation bcbio.variation Public

    Forked from chapmanb/bcbio.variation

    Toolkit to analyze genomic variation data, built on the GATK with Clojure

    Clojure

  4. htslib htslib Public

    Forked from samtools/htslib

    C library for high-throughput sequencing data formats

    C

  5. bwa bwa Public

    Forked from lh3/bwa

    Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

    C

  6. gatk gatk Public

    Forked from broadgsa/gatk

    GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

    Java

Repositories

Showing 10 of 37 repositories
  • MegaQC Public Forked from MultiQC/MegaQC

    Web application to collect and visualise data across multiple MultiQC runs.

    ousamg/MegaQC’s past year of commit activity
    Python 0 GPL-3.0 27 0 13 Updated Jan 23, 2023
  • igv.js Public Forked from igvteam/igv.js

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    ousamg/igv.js’s past year of commit activity
    JavaScript 0 MIT 232 0 0 Updated Mar 8, 2022
  • PyVCF Public Forked from jamescasbon/PyVCF

    A Variant Call Format reader for Python.

    ousamg/PyVCF’s past year of commit activity
    Python 0 224 0 0 Updated Sep 21, 2021
  • MultiQC Public Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    ousamg/MultiQC’s past year of commit activity
    Python 0 GPL-3.0 613 0 0 Updated Mar 2, 2021
  • vcfiterator Public Forked from oyvinev/vcfiterator

    Python module for iterating over a VCF file, parsing and generating data structures.

    ousamg/vcfiterator’s past year of commit activity
    Python 0 MIT 4 0 1 Updated Dec 15, 2020
  • patientMatcher Public Forked from Clinical-Genomics/patientMatcher

    A MatchMaker Exchange server

    ousamg/patientMatcher’s past year of commit activity
    Python 0 MIT 6 0 0 Updated Oct 23, 2020
  • loqusdb Public Forked from Clinical-Genomics/loqusdb

    A simple observation count database

    ousamg/loqusdb’s past year of commit activity
    Python 0 MIT 8 0 0 Updated Oct 8, 2019
  • azure-templates Public
    ousamg/azure-templates’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Jul 30, 2019
  • azure-quickstart-templates Public Forked from Azure/azure-quickstart-templates

    Azure Quickstart Templates

    ousamg/azure-quickstart-templates’s past year of commit activity
    PowerShell 0 MIT 16,390 0 0 Updated Jul 19, 2019
  • beacon Public

    GA4GH Beacon implementation

    ousamg/beacon’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 13, 2018
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