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Commits on Jul 5, 2024

• fix comseg usage

  quentinblampey

  committed
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Commits on Jul 4, 2024

• fixes baysor / comseg

  quentinblampey

  committed
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• misc comseg updates

  quentinblampey

  committed
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• Merge branch 'dev' into comseg_cli

  quentinblampey

  authored
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• norm vector false

  

  tdefa

  committed
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• can set BAYSOR_EXECUTABLE_PATH for snakemake

  quentinblampey

  committed
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Commits on Jul 3, 2024

• tuto_typo

  

  tdefa

  committed
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• tuto2

  

  tdefa

  committed
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• tuto

  

  tdefa

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• precommit

  

  tdefa

  committed
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• support Xenium multimodal segmentation as a prior (gustaveroussy#80)

  quentinblampey

  committed
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Commits on Jun 14, 2024

• minor cleaning/fixes

  quentinblampey

  committed
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Commits on Jun 11, 2024

• Merge branch 'dev' of https://github.com/gustaveroussy/sopa into dev

  quentinblampey

  committed
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• first post publication release

  quentinblampey

  committed
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Commits on Jun 5, 2024

• pre-commit test2

  

  tdefa

  committed
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• pre-commit test

  

  tdefa

  committed
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• doc_cli

  

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  committed
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• cli_comseg

  

  tdefa

  committed
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Commits on Jun 3, 2024

• comseg_patch update and api_tuto"

  

  tdefa

  committed
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Commits on May 30, 2024

• add comseg API

  quentinblampey

  committed
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Commits on May 29, 2024

• Transcript-segmentation API more general

  quentinblampey

  committed
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Commits on May 27, 2024

• use rioxarray by default if installed

  quentinblampey

  committed
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Commits on May 23, 2024

• Merge branch 'dev' of https://github.com/gustaveroussy/sopa into dev

  quentinblampey

  committed
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• update cosmx export FAQ

  quentinblampey

  committed
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Commits on May 22, 2024

• update he notebook tutorial

  quentinblampey

  committed
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• renaming to follow the inference scheme

  stergioc

  committed
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• update xenium explorer reader

  quentinblampey

  committed
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Commits on May 21, 2024

• update explorer tuto

  quentinblampey

  committed
  51edd78

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• add explorer tutorial

  quentinblampey

  committed
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• rename embed -> infer

  quentinblampey

  committed
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Commits on May 17, 2024

• Renamed sopa.embedding into sopa.patches

  quentinblampey

  committed
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• FAQ docs improvement

  quentinblampey

  committed
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Commits on May 7, 2024

• Ensure categorical variables are used for patches clustering

  quentinblampey

  committed
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Commits on Apr 26, 2024

• minor doc update

  quentinblampey

  committed
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• major documentation cleanup

  quentinblampey

  committed
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