Pairwise Sequence Alignment Library

Simple pileup-based variant caller

Visualise and analyse nanopore (ONT) raw signals

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

C++ Library to parse Illumina InterOp files

Custom tools to 'facilitate' BioNano Genomics data analysis

scripts to parse IrysView output

Scripts for repairing (stitching) fragile sites of BioNano genome maps.