forked from h2oai/h2o-2
-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Code for demos from H2O in R meetup. Must have latest R package (git …
…pull, make) to run the data munging part!
- Loading branch information
Showing
2 changed files
with
58 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,29 @@ | ||
library(h2o) | ||
localH2O = new("H2OClient") | ||
h2o.checkClient(localH2O) | ||
|
||
# For hands-on audience participation | ||
# H2O Import, Summary, GLM and K-Means on prostate cancer data set | ||
# prostate.hex = h2o.importFile(localH2O, path = "../../smalldata/logreg/prostate.hex", key = "prostate.hex") | ||
prostate.hex = h2o.importURL(localH2O, path = "https://raw.github.com/0xdata/h2o/master/smalldata/logreg/prostate.csv", key = "prostate.hex") | ||
summary(prostate.hex) | ||
prostate.glm = h2o.glm(y = "CAPSULE", x = c("AGE","RACE","PSA","GLEASON"), data = prostate.hex, family = "binomial", nfolds = 10, alpha = 0.5) | ||
print(prostate.glm) | ||
prostate.km = h2o.kmeans(data = prostate.hex, centers = 5, cols = c("AGE","RACE","GLEASON","CAPSULE","PSA")) | ||
print(prostate.km) | ||
|
||
# Still in Beta! H2O Data Munging on prostate cancer data set | ||
head(prostate.hex, n = 10) | ||
tail(prostate.hex) | ||
summary(prostate.hex$AGE) | ||
summary(prostate.hex[prostate.hex$AGE > 67,]) | ||
prostate.small = as.data.frame(prostate.hex[1:200,]) | ||
glm(CAPSULE ~ AGE + RACE + DPROS + DCAPS, family = binomial, data = prostate.small) | ||
|
||
# R Import, Summary, GLM and K-Means on prostate cancer data set | ||
prostate.data = read.csv(url("https://raw.github.com/0xdata/h2o/master/smalldata/logreg/prostate.csv"), header = TRUE) | ||
summary(prostate.data) | ||
prostate.glm2 = glm(CAPSULE ~ AGE + RACE + PSA + GLEASON, family = binomial, data = prostate.data) | ||
print(prostate.glm2) | ||
prostate.km2 = kmeans(prostate.data[c("AGE","RACE","GLEASON","CAPSULE","PSA")], centers = 5) | ||
print(prostate.km2) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,29 @@ | ||
library(h2o) | ||
localH2O = new("H2OClient") | ||
h2o.checkClient(localH2O) | ||
|
||
# For hands-off demo of H2O vs. R | ||
# H2O Import, Summary and GLM of small airlines data set on local machine | ||
airlines.hex = h2o.importURL(localH2O, path = "https://raw.github.com/0xdata/h2o/master/smalldata/airlines/allyears2k_headers.zip", key = "airlines.hex") | ||
summary(airlines.hex) | ||
x_ignore = c("IsArrDelayed", "ActualElapsedTime", "ArrDelay", "DepDelay", "Canceled", "Diverted", "IsDepDelayed") | ||
myX = setdiff(colnames(airlines.hex), x_ignore) | ||
airlines.glm = h2o.glm(y = "IsArrDelayed", x = myX, data = airlines.hex, family = "binomial", nfolds = 10, alpha = 0.5) | ||
print(airlines.glm) | ||
|
||
# For hands-on demo of running H2O remotely | ||
# H2O Import, Summary and GLM of large airlines data set on remote machine | ||
remoteH2O = new("H2OClient", ip="192.168.1.161", port=54329) | ||
h2o.checkClient(remoteH2O) | ||
|
||
airlines_big.hex = h2o.importFile(remoteH2O, path = "/home/earl/./oldairlines/airlines.orig.all.withheader.25.csv", key = "airlines_big.hex") | ||
summary(airlines_big.hex) | ||
airlines_big.glm = h2o.glm(y = "IsArrDelayed", x = myX, data = airlines_big.hex, family = "binomial", nfolds = 10, alpha = 0.5) | ||
print(airlines_big.glm) | ||
|
||
# Still in Beta! H2O Data Munging on large airlines data set | ||
head(airlines_big.hex, n = 10) | ||
tail(airlines_big.hex) | ||
summary(airlines_big.hex$ArrDelay) | ||
airlines_small.data = as.data.frame(airlines_big.hex[1:10000,]) | ||
glm(IsArrDelayed ~ Origin + Dest, family = binomial, data = airlines_small.data) |