SCISSORS builds upon the Louvain graph-based clustering in Seurat by optimizing parameter selection when reclustering cell groups, with an eye towards identifying rare cell types.

AI-based differential diagnosis of dementia etiologies on multimodal data

A package to help convert different single-cell data formats to each other

Multiome GRN inference.

Reproducibility repository for the Human Neural Organoid Atlas publication

An LC-MS/MS glycan and glycopeptide search engine

This project provides an easy R function for translating R Markdown (.rmd) files to Jupyter Notebook (.ipynb) files.

Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium

An analytics package for single cell data

Conversion between scRNA-seq objects

Toolkit for Single-Cell Velocity

VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps

Annotate Package Load Calls

Resources associated with "A multimodal cell census and atlas of the mammalian primary motor cortex"

Auto-annotations for analysis of the adult human brain

Repository for storing prototype functionality implementations for the BKP

A curated list of Best Artificial Intelligence Resources

Fast C code for identifying and removing primers and adapters

B cell receptor repertoire annotation and lineage construction tool

dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data

An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.

An interactive explorer for single-cell transcriptomics data