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1. faplm faplm Public

   FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models

   Python 93 6

2. ab_opt ab_opt Public

   Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.

   Python 53 10

3. protein-sequence-diffusion-model protein-sequence-diffusion-model Public

   diffusion model for protein sequence generation

   Jupyter Notebook 47 5

4. ab_rmsd ab_rmsd Public

   Calculate the RMSD between two antibody structure (including nanobody and antibody).

   Python 8 4

5. Awesome-Computational-Structural-Biology Awesome-Computational-Structural-Biology Public

   A curated list of awesome self-learning materials in Computational Structural Biology, such as sources, tutorials, etc.

   38

6. lucidrains/denoising-diffusion-pytorch lucidrains/denoising-diffusion-pytorch Public

   Implementation of Denoising Diffusion Probabilistic Model in Pytorch

   Python 8.6k 1.1k